{"id":"W4304693869","doi":"10.1128/jcm.00665-22","title":"A Prolonged Outbreak of Human Adenovirus A31 (HAdV-A31) Infection on a Pediatric Hematopoietic Stem Cell Transplantation Ward with Whole Genome Sequencing Evidence of International Linkages","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Ontario; Hospital for Sick Children; Public Health Agency of Canada; Toronto Public Health; SickKids Foundation; University of Toronto","funders":"","keywords":"Outbreak; Virology; Genotyping; Hematopoietic stem cell transplantation; Mastadenovirus; Transplantation; Genotype; Medicine; Biology; Adenoviridae; Genetics; Gene; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003520616,0.0003013145,0.0001639567,0.0004210253,0.0008620868,0.0005011294,0.0002525953,0.0003659675,0.001246627],"category_scores_gemma":[0.000776338,0.0001892138,0.0002001651,0.0005295812,0.0005808976,0.0003270501,0.0006631315,0.0005575197,0.0001295104],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00108159,"about_ca_system_score_gemma":0.001229026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01845139,"about_ca_topic_score_gemma":0.02404056,"domain_scores_codex":[0.9996309,0.00004220417,0.00003504191,0.00008421067,0.0001079068,0.00009961058],"domain_scores_gemma":[0.9993367,0.0001016339,0.0002137192,0.00003462168,0.00009115373,0.0002221887],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001423238,0.00005371564,0.9690521,0.00004400295,0.00002641551,0.01607354,0.001435787,0.0002327918,0.007491039,0.0001073482,0.0005383727,0.004802605],"study_design_scores_gemma":[0.0000102332,0.0003912768,0.9659674,0.00004305763,0.00003622408,0.02379404,0.003443852,0.0005685535,0.00382916,0.00009372803,0.001806176,0.00001631388],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992064,0.00006258767,0.0001294851,0.00005945935,0.000005335138,0.00001316593,0.00009252434,0.000008332465,0.0004226918],"genre_scores_gemma":[0.9993242,0.00009787624,0.000276516,0.00004566276,0.000009460502,0.00000305719,0.0001365612,0.000002257314,0.0001044704],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01845139,"threshold_uncertainty_score":0.03668797,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05002817448115937,"score_gpt":0.3601704910302949,"score_spread":0.3101423165491355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}