{"id":"W4304698211","doi":"10.12688/wellcomeopenres.17099.3","title":"Development and implementation of a customised rapid syndromic diagnostic test for severe pneumonia","year":2022,"lang":"en","type":"preprint","venue":"Wellcome Open Research","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"NIHR Cambridge Biomedical Research Centre; Academy of Medical Sciences; Medical Research Council; National Institute for Health and Care Research; Wellcome Trust","keywords":"Pneumonia; Medicine; Cohort; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002434459,0.0002395619,0.0006133072,0.0005492631,0.0005433063,0.000135189,0.0005627421,0.0001730058,0.001383546],"category_scores_gemma":[0.0007881364,0.0002246841,0.000105547,0.0003264696,0.0001432915,0.00006616372,0.002655386,0.001002777,0.00002609019],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004529109,"about_ca_system_score_gemma":0.00227232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000395211,"about_ca_topic_score_gemma":0.0001261081,"domain_scores_codex":[0.9973056,0.0002314699,0.0006364554,0.0006693354,0.0006686396,0.000488547],"domain_scores_gemma":[0.9965222,0.002132348,0.0001957268,0.0005839916,0.0003288848,0.0002368179],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001362423,0.004584213,0.5294113,0.02169637,0.00274856,0.0006179078,0.01116337,0.0002439824,0.1780887,0.001530845,0.02843648,0.2201159],"study_design_scores_gemma":[0.009694176,0.00251888,0.4614772,0.001332578,0.0003085214,0.0002601003,0.005733989,0.000207905,0.01083857,0.0005498796,0.5062547,0.0008234405],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9830821,0.0002767795,0.00001667683,0.001975172,0.0002259026,0.01015626,0.000351767,0.00003130894,0.00388408],"genre_scores_gemma":[0.9885246,0.0005560672,0.001114248,0.0001252218,0.00007900004,0.006763913,0.0004303039,0.00007341544,0.002333265],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4778183,"threshold_uncertainty_score":0.9995293,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1318813649215855,"score_gpt":0.4393955621642328,"score_spread":0.3075141972426473,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}