{"id":"W4304761866","doi":"10.3390/cells11203203","title":"Analysis of the Compositional Features and Codon Usage Pattern of Genes Involved in Human Autophagy","year":2022,"lang":"en","type":"article","venue":"Cells","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"King Saud University","keywords":"Gene; Autophagy; Biology; Codon usage bias; Genome; Genetics; Human genome; GC-content; Start codon; Computational biology; Nucleotide","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001586215,0.0002147247,0.0002813312,0.001331636,0.000239059,0.0002547224,0.00007785633,0.0001458922,0.001047016],"category_scores_gemma":[0.0005523083,0.0000764689,0.0002828586,0.00146612,0.0001405836,0.000114617,0.000120142,0.0002082394,0.0003483162],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001474412,"about_ca_system_score_gemma":0.0002087344,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007929969,"about_ca_topic_score_gemma":0.001800243,"domain_scores_codex":[0.9998479,0.00002978855,0.00002281934,0.00004464096,0.00003857522,0.00001631719],"domain_scores_gemma":[0.9996979,0.00009345119,0.0001000688,0.00001992839,0.00004991469,0.00003871278],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009442506,0.00007010603,0.104716,0.0005899678,0.0001758627,0.0009994521,0.0002994186,0.0007749946,0.8538347,0.0002765242,0.0003895402,0.03692901],"study_design_scores_gemma":[0.0000232457,0.0004398377,0.8055201,0.00008578919,0.0003668654,0.005207751,0.0003542549,0.005644635,0.172301,0.000551123,0.009460944,0.0000445457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920115,0.001753845,0.002381613,0.00002997734,0.00001381719,0.00002346707,0.002950335,0.00004154862,0.0007938663],"genre_scores_gemma":[0.9821212,0.000950399,0.01005665,0.00003625495,0.00001359642,0.00003931312,0.006016106,0.00002944849,0.0007371291],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001331636,"threshold_uncertainty_score":0.003502607,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01225180081508978,"score_gpt":0.2648347048223579,"score_spread":0.2525829040072681,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}