{"id":"W4306156061","doi":"10.1094/phyto-07-22-0262-sa","title":"Development of Genome-Driven, Lifestyle-Informed Markers for Identification of the Cereal-Infecting Pathogens <i>Xanthomonas translucens</i> Pathovars <i>undulosa</i> and <i>translucens</i>","year":2022,"lang":"en","type":"article","venue":"Phytopathology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of Food and Agriculture; American Malting Barley Association","keywords":"Pathovar; Biology; Xanthomonas campestris; Outbreak; Xanthomonas; Microbiology; Virology; Genetics; Bacteria; Pseudomonadaceae; Pseudomonas","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008443462,0.0002278628,0.0004452673,0.00003021539,0.0006691479,0.00001193737,0.000378644,0.00008321578,0.00001873394],"category_scores_gemma":[0.00009158389,0.0001128924,0.0001919355,0.000353628,0.0001951137,0.00007289321,0.0002252729,0.0001630675,6.641183e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004569223,"about_ca_system_score_gemma":0.00006172548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001094454,"about_ca_topic_score_gemma":0.0003365893,"domain_scores_codex":[0.9978732,0.0002335939,0.000820576,0.0004184957,0.0002540546,0.0004000151],"domain_scores_gemma":[0.9987034,0.0004228063,0.0005728888,0.0001380819,0.0001040964,0.00005874623],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001314728,0.0001023453,0.01387537,0.0000886936,0.00003019524,0.000002801112,0.001394767,0.00002126966,0.9730709,0.00009990257,0.00002340174,0.01115884],"study_design_scores_gemma":[0.0009463148,0.0003957879,0.8229526,0.00004443522,0.0001604183,0.000262114,0.00184878,0.00007507783,0.1414798,0.0002188508,0.03109678,0.0005190743],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951329,0.0002693404,0.0001012659,0.0004039808,0.0003539412,0.0007966864,0.002786815,0.00003640883,0.0001186924],"genre_scores_gemma":[0.9979771,0.0001180883,0.001163444,0.0001724999,0.00005442615,0.000253971,0.0002316115,0.000004470864,0.00002442077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8315911,"threshold_uncertainty_score":0.5146613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01728978380987381,"score_gpt":0.2188055773888097,"score_spread":0.2015157935789359,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}