{"id":"W4306165643","doi":"10.1002/pmic.202100389","title":"An emerging field: Post‐translational modification in microbiome","year":2022,"lang":"en","type":"review","venue":"PROTEOMICS","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; University of Ottawa","funders":"","keywords":"Microbiome; Computational biology; Posttranslational modification; Biology; Human microbiome; Glycosylation; Proteases; Bioinformatics; Genetics; Biochemistry; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002558342,0.0003048611,0.0007507827,0.0003473362,0.0001960028,0.00003049339,0.0003893649,0.0004186287,0.001611042],"category_scores_gemma":[0.00002426859,0.0003007677,0.0002488349,0.0002148734,0.00006364323,0.0001592019,0.00007320621,0.0007918664,0.0001350075],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009248868,"about_ca_system_score_gemma":0.0002228727,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001882732,"about_ca_topic_score_gemma":0.00002400483,"domain_scores_codex":[0.9984312,0.000274856,0.0005200737,0.0004315782,0.00002807051,0.0003142077],"domain_scores_gemma":[0.999263,0.000125267,0.0002664845,0.00030963,0.00002131761,0.00001424973],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004888695,0.0002241852,0.000009635589,0.002288496,0.000127803,0.000005604745,0.0004059211,0.00001855837,0.01784772,0.0007728844,0.0003923769,0.9778579],"study_design_scores_gemma":[0.0002234405,0.00008385998,0.00000480555,0.0006012404,0.00008036433,0.00007626588,0.0000686632,0.000004475951,0.0007066372,0.00007620223,0.9976968,0.0003772607],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005777225,0.996713,0.000401047,0.00009467563,0.0004818742,0.001100437,0.0003462547,0.00006204176,0.0002228762],"genre_scores_gemma":[0.0002782653,0.9942672,0.0008620212,0.0001003766,0.00005997871,0.0002295768,0.003663452,0.00005081603,0.0004882745],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9973044,"threshold_uncertainty_score":0.9999444,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05170163207393182,"score_gpt":0.3281699371678761,"score_spread":0.2764683050939443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}