{"id":"W4306168141","doi":"10.3201/eid2812.221160","title":"Monkeypox Virus Detection in Different Clinical Specimen Types","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; Public Health Ontario; University of Toronto","funders":"","keywords":"Monkeypox; Virology; Virus; Medicine; Biology; Vaccinia; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002094277,0.0001569628,0.0002616238,0.0002477288,0.0004250248,0.00001660122,0.0001782589,0.00006955175,0.003805923],"category_scores_gemma":[0.0001984408,0.0001441732,0.0001635879,0.0002451949,0.0001056339,0.00006715942,0.0002611713,0.0005617068,0.0003724672],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001645878,"about_ca_system_score_gemma":0.00005752925,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007152596,"about_ca_topic_score_gemma":0.0005175089,"domain_scores_codex":[0.9982142,0.0006237861,0.0003217225,0.0003320909,0.00007976092,0.0004284645],"domain_scores_gemma":[0.9994088,0.0002002549,0.00007702286,0.0002332662,0.00002219933,0.00005846068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001100948,0.003097722,0.7595794,0.00003391513,0.0005073868,0.0001096647,0.0003780197,0.0005478559,0.07252835,0.0003040518,0.01249399,0.1493187],"study_design_scores_gemma":[0.004067901,0.001049381,0.758709,0.00001643908,0.00008879845,0.00006475534,0.0002607722,0.000122756,0.01581286,0.001249028,0.218046,0.0005123694],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934724,0.002477542,0.00004204928,0.00009297767,0.001497247,0.0002205219,0.00008660339,0.0001800635,0.001930579],"genre_scores_gemma":[0.9982182,0.0002013891,7.553766e-7,0.0001460075,0.0001286469,0.0001407104,0.00006844868,0.00001926655,0.00107658],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.205552,"threshold_uncertainty_score":0.9971047,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01692279567327757,"score_gpt":0.3004421606432253,"score_spread":0.2835193649699477,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}