{"id":"W4306247862","doi":"10.1590/0074-02760220118","title":"Characterisation of Neisseria meningitidis cc11/ET-15 variant by whole genome sequencing","year":2022,"lang":"en","type":"article","venue":"Memórias do Instituto Oswaldo Cruz","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundação Oswaldo Cruz; University of Oxford; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Commission; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Wellcome Trust","keywords":"Neisseria meningitidis; Outbreak; Meningococcal disease; Biology; Genome; Virulence; clone (Java method); Genetics; Virology; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003461478,0.0005397857,0.0004325261,0.0007211991,0.0002630833,0.0005644377,0.0003084089,0.0005326599,0.0008892365],"category_scores_gemma":[0.0008530412,0.0001475334,0.0007530169,0.001109381,0.0002463681,0.0001876172,0.0003207194,0.0005044191,0.0005377767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003177829,"about_ca_system_score_gemma":0.0003640634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003555755,"about_ca_topic_score_gemma":0.004801693,"domain_scores_codex":[0.9996682,0.00002636633,0.00003071758,0.0001164459,0.0001105195,0.0000476921],"domain_scores_gemma":[0.9994687,0.0000992086,0.0001419183,0.00007591854,0.0001595021,0.00005474338],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004216479,0.00007262755,0.02343852,0.0003507646,0.0001359238,0.0005905079,0.0002770915,0.000666127,0.9611977,0.0001744053,0.0006799249,0.01199469],"study_design_scores_gemma":[0.00005192115,0.0007524194,0.5729565,0.0001813919,0.0006722432,0.005245338,0.0009866373,0.005649683,0.3814508,0.0003590135,0.0316194,0.00007460597],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9721693,0.001211519,0.008125822,0.0001200095,0.00004793257,0.0001101919,0.01657175,0.0001272907,0.001516046],"genre_scores_gemma":[0.9168997,0.001041352,0.02823561,0.0002055265,0.00002540608,0.0001336429,0.05141068,0.0002324873,0.001815642],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003555755,"threshold_uncertainty_score":0.007070124,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01756458109159065,"score_gpt":0.2388950376664545,"score_spread":0.2213304565748639,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}