{"id":"W4306681446","doi":"10.7717/peerj.14260","title":"Fecal fungal microbiota alterations associated with clinical phenotypes in Crohn’s disease in southwest China","year":2022,"lang":"en","type":"article","venue":"PeerJ","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Crohn's disease; Phenotype; Feces; Disease; Fecal bacteriotherapy; Biology; Clinical phenotype; Gut flora; Microbiology; Fungal disease; Medicine; Immunology; Pathology; Clostridium difficile; Genetics; Antibiotics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004109067,0.0002693235,0.0003823364,0.001028862,0.0007907395,0.0003851637,0.0001747817,0.0002873005,0.0007025964],"category_scores_gemma":[0.0005755987,0.0002400304,0.0003822396,0.001347237,0.0003051342,0.0002299106,0.0004052764,0.0002153932,0.00005721263],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005327825,"about_ca_system_score_gemma":0.0005542334,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02646828,"about_ca_topic_score_gemma":0.03033911,"domain_scores_codex":[0.9996871,0.00005738113,0.00005570079,0.00008625568,0.00004653034,0.00006715191],"domain_scores_gemma":[0.9995809,0.00004634724,0.0001483054,0.00002926149,0.0000705468,0.0001245633],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000938366,0.00002191729,0.9957907,0.0000251283,0.00003983407,0.0002666971,0.0002548898,0.00003422658,0.001140442,0.00001888017,0.00005991178,0.002253675],"study_design_scores_gemma":[0.000003457957,0.00002835085,0.9993082,0.00000409079,0.00001798711,0.0001671773,0.00019366,0.0001104614,0.00005019601,0.00001395576,0.0001001431,0.000002232846],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995105,0.0002212764,0.00004247566,0.00003389964,0.000002315502,0.000004710673,0.00007717241,0.000001067002,0.0001066172],"genre_scores_gemma":[0.9995919,0.0001118477,0.00005957267,0.00002561847,0.000004842358,0.000003384791,0.0001155149,7.314906e-7,0.00008657422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02646828,"threshold_uncertainty_score":0.05262846,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009643601873786805,"score_gpt":0.2582855432174885,"score_spread":0.2486419413437017,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}