{"id":"W4306974382","doi":"10.1111/tbed.14744","title":"Evolutionary dynamics of the clade 2.3.4.4B H5N8 high‐pathogenicity avian influenza outbreaks in coastal seabirds and other species in southern Africa from 2017 to 2019","year":2022,"lang":"en","type":"article","venue":"Transboundary and Emerging Diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"South African National Parks","keywords":"Biology; Clade; Zoology; Outbreak; Influenza A virus subtype H5N1; Seabird; Phylogenetic tree; Lineage (genetic); Monophyly; Ecology; Virus; Virology; Predation; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002862299,0.0002391673,0.0002007873,0.001097145,0.000487058,0.0006128063,0.0002396784,0.0002989113,0.0008187399],"category_scores_gemma":[0.0007729359,0.0001558144,0.0002282889,0.00101786,0.0003047629,0.0003419609,0.0003861556,0.0002931293,0.0001526523],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005845975,"about_ca_system_score_gemma":0.0003115016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01472028,"about_ca_topic_score_gemma":0.02302282,"domain_scores_codex":[0.9998133,0.00003439159,0.00001184806,0.00005997148,0.00002120219,0.00005938867],"domain_scores_gemma":[0.9995247,0.00004748386,0.0002541334,0.00001531663,0.00006562635,0.00009268649],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001973315,0.00001912982,0.985663,0.00003883216,0.00007849843,0.0004593709,0.001515055,0.0001977953,0.005677152,0.00008738628,0.0002136256,0.005852772],"study_design_scores_gemma":[0.000001940667,0.00002020496,0.9981912,0.00001360683,0.00001091763,0.0002057568,0.0008782448,0.0002007429,0.00009306683,0.00001182422,0.000369798,0.000002693407],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994138,0.0001741083,0.00002465705,0.00002745723,0.000001851551,0.000002827418,0.000172327,0.000001188436,0.0001817325],"genre_scores_gemma":[0.9994438,0.0001419614,0.00005040417,0.00001361827,0.000002604772,0.000004150863,0.0002576236,0.000001007985,0.00008477542],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01472028,"threshold_uncertainty_score":0.02926922,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03216600283975607,"score_gpt":0.2936982600802143,"score_spread":0.2615322572404583,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}