{"id":"W4307200775","doi":"10.1038/s42003-022-04074-5","title":"Chromosome-scale genome assembly of the brown anole (Anolis sagrei), an emerging model species","year":2022,"lang":"en","type":"article","venue":"Communications Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation; Human Frontier Science Program; National Institute of General Medical Sciences; Banting Research Foundation; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; John Templeton Foundation","keywords":"Anolis; Biology; Evolutionary biology; Chromosome; Genome; Scale (ratio); Zoology; Genetics; Lizard; Geography; Gene; Cartography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001753809,0.0001106839,0.0001507729,0.00003826003,0.0005879355,0.000006337715,0.001503831,0.00006015971,0.00002543181],"category_scores_gemma":[0.00001983744,0.00009563813,0.00009753855,0.0001385377,0.0003310555,9.902615e-7,0.002339476,0.0001291798,0.000001225305],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002036382,"about_ca_system_score_gemma":0.00008294047,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003212063,"about_ca_topic_score_gemma":0.0001475856,"domain_scores_codex":[0.9990886,0.0002272622,0.000228993,0.0002181525,0.00005543481,0.0001815875],"domain_scores_gemma":[0.9978722,0.00001858174,0.0001363008,0.001868238,0.00007465796,0.00002998436],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000008142455,0.00009490995,0.004107269,0.000002677828,0.00004584583,2.6476e-8,0.000337958,0.002125311,0.9912122,0.001482154,0.0001585328,0.0004250106],"study_design_scores_gemma":[0.001286293,0.001177729,0.09312251,0.000008866486,0.0001483276,0.00004513139,0.003913188,0.01313636,0.2666525,0.004492501,0.6150268,0.0009897678],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9894108,0.004696994,0.0002559972,0.0009892219,0.0001007948,0.0001681942,0.0002693201,0.000005022242,0.004103638],"genre_scores_gemma":[0.995811,0.001227991,0.00177689,0.0002429354,0.00004432788,0.00007951084,0.0002059282,0.00001497163,0.0005964197],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7245597,"threshold_uncertainty_score":0.4521984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04078416188720352,"score_gpt":0.2821715639766679,"score_spread":0.2413874020894644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}