{"id":"W4307527819","doi":"10.1101/2022.10.21.512844","title":"Gene Gain and Loss from the Asian Corn Borer W Chromosome","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genetics; Lepidoptera genitalia; Chromosome; Gene; Chromosome 4; Ostrinia furnacalis; Pyralidae; Chromosome 3; Chromosome 22; Genome; Ostrinia; Chromosome 12; Chromosome 19; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003353628,0.0004791764,0.0003484059,0.00004896127,0.0003136039,0.0001567015,0.000717669,0.0004772246,0.0001021793],"category_scores_gemma":[0.00008618343,0.0004395217,0.000146739,0.0001583487,0.0002225654,0.00000411728,0.001168935,0.0005987347,0.00001301981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007065491,"about_ca_system_score_gemma":0.0004890712,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008368518,"about_ca_topic_score_gemma":0.00002707462,"domain_scores_codex":[0.9976598,0.0001873268,0.0003468798,0.001028717,0.0003048694,0.0004724305],"domain_scores_gemma":[0.9977865,0.00002445933,0.0002472434,0.00161676,0.000161016,0.0001640403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006408067,0.00006182737,0.01287705,0.00005694587,0.0002364046,0.00005936211,0.00001656646,0.00003630152,0.9846285,0.00006644541,0.001891877,0.000004663767],"study_design_scores_gemma":[0.0005630508,0.0001280356,0.172169,0.00006352903,0.0001434362,7.233525e-8,0.00001374185,0.00003135137,0.7446629,0.00001015138,0.0813315,0.0008832457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.988338,0.008369328,0.0002711656,0.0004800683,0.0007548974,0.000476805,0.001228255,0.00005162298,0.00002984292],"genre_scores_gemma":[0.9941907,0.001902734,0.001389433,0.0009714579,0.001213022,0.0001754879,0.00001281547,0.0001185479,0.00002582941],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2399656,"threshold_uncertainty_score":0.9998056,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007759382279205303,"score_gpt":0.2084514636020129,"score_spread":0.2006920813228076,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}