{"id":"W4307869266","doi":"10.1111/jbg.12747","title":"Testicular hypoplasia in Nellore Cattle: Genetic analysis and functional analysis of <scp>genome‐wide</scp> association study results","year":2022,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Candidate gene; Single-nucleotide polymorphism; Genetics; SNP; Runs of Homozygosity; Genome-wide association study; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008295604,0.0002784225,0.0002707526,0.001353422,0.0004454371,0.0004341436,0.0003208264,0.0002558895,0.001407082],"category_scores_gemma":[0.000642308,0.0001316128,0.0003661209,0.00120253,0.0002179755,0.00009985363,0.0002306382,0.0002295715,0.00007991208],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002573245,"about_ca_system_score_gemma":0.0002492169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005835054,"about_ca_topic_score_gemma":0.01012441,"domain_scores_codex":[0.9994979,0.0001628129,0.00004179588,0.0001571515,0.00009307729,0.00004721572],"domain_scores_gemma":[0.9995809,0.000120529,0.0001661589,0.00002929888,0.00003455628,0.00006860412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008949245,0.00013094,0.9337298,0.00009577832,0.000536913,0.001420759,0.000297937,0.0003020686,0.05177861,0.0001312226,0.0002229188,0.01045804],"study_design_scores_gemma":[0.000008336971,0.00004053647,0.9983424,0.000004330699,0.00008728464,0.0004654024,0.00003572291,0.0003702975,0.0003959759,0.00001462693,0.0002323541,0.000002704051],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990288,0.0001816162,0.0002879397,0.0000231262,0.000001952646,0.000003477385,0.0002431241,0.000005050978,0.0002250193],"genre_scores_gemma":[0.9983961,0.0001080888,0.0007043097,0.00001865992,0.000007637018,0.000008346792,0.0004933678,0.00000335805,0.0002601576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005835054,"threshold_uncertainty_score":0.01160216,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01322592081023798,"score_gpt":0.2307212442205938,"score_spread":0.2174953234103558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}