{"id":"W4307869266","doi":"10.1111/jbg.12747","title":"Testicular hypoplasia in Nellore Cattle: Genetic analysis and functional analysis of <scp>genome‐wide</scp> association study results","year":2022,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Candidate gene; Single-nucleotide polymorphism; Genetics; SNP; Runs of Homozygosity; Genome-wide association study; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000804569,0.0001620747,0.0004409507,0.0005666785,0.0001237702,0.00002923509,0.0001438407,0.00009295881,0.000007888021],"category_scores_gemma":[0.0003738549,0.0001633006,0.0001740516,0.001035108,0.00005395471,0.000004869833,0.0001605023,0.0002182025,1.280832e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004149755,"about_ca_system_score_gemma":0.00007835016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002759951,"about_ca_topic_score_gemma":0.00006657296,"domain_scores_codex":[0.998202,0.0001558581,0.0007001528,0.0002985508,0.0004356911,0.0002077934],"domain_scores_gemma":[0.9987032,0.0001791167,0.0006282179,0.0001539664,0.0002254575,0.0001100008],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001622415,0.0002442038,0.8957461,0.00000814139,0.002737626,0.000004444699,0.0007498971,0.07445999,0.02541366,0.000006754002,0.0001689007,0.0002981082],"study_design_scores_gemma":[0.001021321,0.003714592,0.9881926,0.000002983339,0.003446266,0.00002077123,0.002037575,0.0006446104,0.0004820176,0.00005945453,0.0002952344,0.00008262283],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960834,0.002484738,0.001043029,0.00004476843,0.00008987988,0.0001081191,0.00007068484,0.000002042163,0.00007334175],"genre_scores_gemma":[0.9960336,0.0001867799,0.003462889,0.00003769854,0.0001207752,0.000003819599,0.00003380347,0.00001194378,0.0001086569],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09244653,"threshold_uncertainty_score":0.6659207,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01322592081023798,"score_gpt":0.2307212442205938,"score_spread":0.2174953234103558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}