{"id":"W4307870439","doi":"10.3389/fmicb.2022.1040932","title":"Comparative genomic and functional analysis of Arthrobacter sp. UMCV2 reveals the presence of luxR-related genes inducible by the biocompound N, N-dimethylhexadecilamine","year":2022,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Wilfrid Laurier University","funders":"Coordinación de la Investigación Científica; Universidad Michoacana de San Nicolás de Hidalgo","keywords":"Biology; Autoinducer; Quorum sensing; Operon; Gene; Genome; Genetics; Arthrobacter; Gene cluster; Bacterial genome size; Swarming motility; Bacteria; Virulence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001441595,0.0004203171,0.0003337958,0.001053014,0.0002146293,0.0003553841,0.0002383662,0.0002527939,0.000707062],"category_scores_gemma":[0.0003712336,0.0001282031,0.0006187172,0.001098612,0.0001732026,0.000130425,0.0003201926,0.0002972095,0.0003919227],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002079362,"about_ca_system_score_gemma":0.0002733573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002166159,"about_ca_topic_score_gemma":0.001714569,"domain_scores_codex":[0.9998289,0.00001830668,0.00001605793,0.000057431,0.00004820864,0.00003100809],"domain_scores_gemma":[0.9997476,0.00004936974,0.00007634352,0.00002106832,0.00004940743,0.00005611317],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004225815,0.00005925765,0.005966828,0.0001460431,0.00003779228,0.0005727116,0.000165986,0.0001531827,0.987437,0.00007358329,0.0001073604,0.004857718],"study_design_scores_gemma":[0.00005943266,0.0009357924,0.6989002,0.0001173741,0.0004300769,0.004613834,0.00103287,0.003225389,0.2794628,0.0001724063,0.0109845,0.0000653113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9889542,0.0009110901,0.001379951,0.00005742648,0.00001628777,0.00003649967,0.007703326,0.00004684274,0.0008944877],"genre_scores_gemma":[0.9647861,0.0007234453,0.004806248,0.0001016612,0.00001871179,0.00007585224,0.02800669,0.00004353996,0.001437737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002166159,"threshold_uncertainty_score":0.004307091,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01139540328677764,"score_gpt":0.222852227692737,"score_spread":0.2114568244059594,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}