{"id":"W4308057531","doi":"10.1038/s41416-022-02014-y","title":"Increased FOXJ1 protein expression is associated with improved overall survival in high-grade serous ovarian carcinoma: an Ovarian Tumor Tissue Analysis Consortium Study","year":2022,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Health Services; Canada's Michael Smith Genome Sciences Centre; Vancouver General Hospital; University of British Columbia; Foothills Medical Centre; University of Alberta; University of Calgary","funders":"Medical Research and Materiel Command; National Center for Advancing Translational Sciences; European Regional Development Fund; Instituto de Salud Carlos III; Cancer Council Tasmania; National Health and Medical Research Council; Horizon 2020 Framework Programme; National Institutes of Health; Translational Cancer Research Network; University College London; Cancer Institute NSW; National Cancer Institute; Peter MacCallum Foundation; NSW Ministry of Health; American Cancer Society; Cancer Council South Australia; Pomorski Uniwersytet Medyczny W Szczecinie; Ovarian Cancer Research Fund; Ministerio de Economía y Competitividad; Cancer Council Victoria; University of Pittsburgh; University of New South Wales; Cancer Council NSW; Universität Heidelberg; Canadian Institutes of Health Research; Medical Research Council; Department of Health and Social Care; National Institute for Health and Care Research; Michael Smith Health Research BC; Canada Research Chairs; NIHR Cambridge Biomedical Research Centre; University of Cambridge; Fred C. and Katherine B. Andersen Foundation; Cancer Australia; Ovarian Cancer Action; Calgary Laboratory Services; Mayo Foundation for Medical Education and Research; Deutsche Forschungsgemeinschaft; VGH and UBC Hospital Foundation; U.S. Department of Defense; Cancer Research UK; Minnesota Ovarian Cancer Alliance; National Center for Research Resources; BC Cancer Foundation; Oak Foundation; Ovarian Cancer Australia; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Cancer Research Society; European Commission","keywords":"Immunohistochemistry; Serous carcinoma; Serous fluid; Tissue microarray; Ovarian carcinoma; Ovarian cancer; Oncology; Univariate analysis; Survival analysis; Medicine; Pathology; Biology; Multivariate analysis; Internal medicine; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000553957,0.0001713518,0.0004073087,0.0001713965,0.0001588575,0.00008004605,0.0002420954,0.00007326053,0.0002611035],"category_scores_gemma":[0.00003870309,0.0001912335,0.0001075189,0.0003995343,0.00003873575,0.00003323848,0.00004963623,0.0003075795,1.180452e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001855747,"about_ca_system_score_gemma":0.0002870031,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01144486,"about_ca_topic_score_gemma":0.01859961,"domain_scores_codex":[0.997778,0.0006196169,0.000516455,0.0003465392,0.0004883074,0.0002510761],"domain_scores_gemma":[0.998904,0.000008510524,0.0005023049,0.0002112106,0.0002379886,0.0001359426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00115921,0.001003671,0.235642,0.000009175548,0.0006492508,0.0004522742,0.0002423986,0.001852363,0.7582538,0.000002246328,0.00008813542,0.0006455378],"study_design_scores_gemma":[0.007059832,0.001521098,0.9404998,0.0000411586,0.0003454621,0.0001102328,0.0003498579,0.0002138693,0.04915364,0.00001442406,0.0004007717,0.0002898873],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982446,0.0005079273,0.000257436,0.00008208088,0.0001305521,0.0005110808,0.0002481567,0.000008426353,0.000009704617],"genre_scores_gemma":[0.9991949,0.000009353022,0.0001821299,0.00010233,0.000111787,0.00008178242,0.0001634423,0.00003321992,0.0001210299],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7091001,"threshold_uncertainty_score":0.9993084,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009728865835018344,"score_gpt":0.2471646536283157,"score_spread":0.2374357877932974,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). 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