{"id":"W4308156625","doi":"10.1016/j.isci.2022.105483","title":"YihE is a novel binding partner of Rho and regulates Rho-dependent transcription termination in the Cpx stress response","year":2022,"lang":"en","type":"article","venue":"iScience","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Cell biology; Transcription factor; Proteases; Transcription (linguistics); Biology; Rho-associated protein kinase; Chemistry; Kinase; Genetics; Biochemistry; Gene; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005697282,0.00005797878,0.00005792263,0.00006085845,0.00009960429,0.00001773878,0.0002238756,0.00005782837,0.00001127738],"category_scores_gemma":[0.00002802512,0.00004490174,0.00001908777,0.0001599142,0.0001342343,0.000003701864,0.0001039473,0.00006581241,2.464381e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008694652,"about_ca_system_score_gemma":0.00002974272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001888591,"about_ca_topic_score_gemma":0.00002805409,"domain_scores_codex":[0.9993413,0.00007421231,0.0001217278,0.0002134219,0.0001311611,0.0001181758],"domain_scores_gemma":[0.9997324,0.00001111687,0.00005710731,0.0001691991,0.00001749068,0.00001271857],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009244145,0.00004708994,0.0006133031,0.000003937805,0.000001753278,8.380244e-7,0.0004418659,0.00002381556,0.9961284,0.00004835892,0.00002732855,0.002570875],"study_design_scores_gemma":[0.0002689256,0.000331993,0.03171588,0.000005841677,0.000004261613,0.00002427058,0.0006724537,0.0001980101,0.9625022,0.00004644147,0.004156522,0.00007323111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983609,0.0002313675,0.00004214403,0.001091262,0.00007465677,0.0001139678,0.00005405582,0.000002465203,0.00002920176],"genre_scores_gemma":[0.9995131,0.0000574261,0.0001086552,0.0001019032,0.00001311255,0.00001789663,0.000009961283,0.00000325413,0.0001746522],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03362622,"threshold_uncertainty_score":0.183104,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01460426312428682,"score_gpt":0.2530404498175378,"score_spread":0.238436186693251,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}