{"id":"W4308459163","doi":"10.1136/gutjnl-2022-328403","title":"Longitudinal transkingdom gut microbial approach towards decompensation in outpatients with cirrhosis","year":2022,"lang":"en","type":"article","venue":"Gut","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute on Alcohol Abuse and Alcoholism; Agency for Healthcare Research and Quality; Bausch Health; Office of Research and Development; U.S. Department of Veterans Affairs","keywords":"Decompensation; Archaea; Gut flora; Crenarchaeota; Biology; Eubacterium; Microbiology; Cirrhosis; Internal medicine; Gastroenterology; Medicine; Bacteria; Immunology; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009226942,0.00009566979,0.0001484898,0.0001305462,0.00008830725,0.00001041307,0.00005711674,0.00002403886,0.0001792819],"category_scores_gemma":[0.000001248941,0.00008630964,0.00004760416,0.0002058165,0.0000205137,0.00007681549,0.00001078378,0.0001392299,0.000009598711],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001076738,"about_ca_system_score_gemma":0.00009524679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003706117,"about_ca_topic_score_gemma":0.00005667675,"domain_scores_codex":[0.999144,0.00004731519,0.0001533992,0.0002236124,0.0002750854,0.0001566156],"domain_scores_gemma":[0.9997534,0.000009482291,0.00003765828,0.0001137399,0.000028308,0.00005747962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004090154,0.001250643,0.975767,0.0003619166,0.0002993308,0.0002336414,0.008648454,0.001087976,0.003658397,0.0002288106,0.0001596234,0.004214076],"study_design_scores_gemma":[0.005398743,0.0003942061,0.9919173,0.00004871589,0.0003711775,0.00008072692,0.0003906433,0.0005287032,0.0004920804,0.00002859575,0.0002008391,0.000148231],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958425,0.00004369611,0.001320994,0.0001659363,0.00008366583,0.0003968832,0.0000492467,0.00003110114,0.002065937],"genre_scores_gemma":[0.9983016,0.000007130745,0.0007784815,0.0001652191,0.00004259888,0.0000748526,0.000539024,0.00001421601,0.00007684636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01615036,"threshold_uncertainty_score":0.3519605,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02269172251934136,"score_gpt":0.2459766041679181,"score_spread":0.2232848816485767,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}