{"id":"W4308527370","doi":"10.1371/journal.pbio.3001874","title":"Virus-derived gene transfer agents benefit host cells by providing templates for DNA repair","year":2022,"lang":"en","type":"letter","venue":"PLoS Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; DNA; Gene transfer; Horizontal gene transfer; Gene; DNA repair; Template; Virus; Computational biology; Genetics; Cell biology; Genome; Nanotechnology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001208059,0.0005107564,0.0005037393,0.00009435067,0.0001729485,0.00002103288,0.0004646776,0.001077944,0.0002267058],"category_scores_gemma":[0.00003475913,0.0005228426,0.0004023208,0.00006856378,0.00007704687,0.000002311503,0.0001796068,0.000525747,0.00001002509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000416258,"about_ca_system_score_gemma":0.00005350405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002783892,"about_ca_topic_score_gemma":0.00001245264,"domain_scores_codex":[0.9976499,0.00007064256,0.00042424,0.001033561,0.0001211185,0.0007005543],"domain_scores_gemma":[0.9991499,0.00005918257,0.00007960364,0.0005709946,0.00006439773,0.00007589154],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005063604,0.00003572084,0.00003431825,0.0001324416,0.0003233909,0.000008733745,0.00002631307,0.00002434744,0.6983358,0.000001146053,0.3009487,0.00007848461],"study_design_scores_gemma":[0.0002944324,0.0004423874,0.000005604681,0.000008083035,0.00008320696,0.00000719968,0.00000647344,0.00006191402,0.5042027,0.000007308005,0.4945325,0.0003482214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"commentary","genre_scores_codex":[0.9168957,0.01244265,0.01431586,0.03317173,0.003374619,0.004576197,0.01443584,0.0004305427,0.0003568868],"genre_scores_gemma":[0.2370478,0.008902198,0.009861229,0.5758414,0.01959819,0.006927604,0.1216949,0.001719171,0.01840751],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6798479,"threshold_uncertainty_score":0.9997223,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01671126890549294,"score_gpt":0.2772978580606379,"score_spread":0.260586589155145,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}