{"id":"W4308869288","doi":"10.3390/genes13112075","title":"Evaluation of DNA Methylation Array for Glioma Tumor Profiling and Description of a Novel Epi-Signature to Distinguish IDH1/IDH2 Mutant and Wild-Type Tumors","year":2022,"lang":"en","type":"article","venue":"Genes","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hamilton Health Sciences; St. Joseph’s Healthcare Hamilton; Hamilton Regional Laboratory Medicine Program; Population Health Research Institute; McMaster University","funders":"","keywords":"IDH1; Mutant; IDH2; Biology; DNA methylation; Wild type; Glioma; Methylation; Cancer research; DNA; Genetics; Computational biology; Molecular biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007857974,0.00009427637,0.0002239873,0.0001488885,0.00008706704,0.000007394603,0.00002505716,0.00002331585,0.00001122408],"category_scores_gemma":[0.0004417905,0.00008221783,0.00003623715,0.0002433516,0.00002181016,0.00003424279,0.00002754219,0.00003710692,7.774477e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006728344,"about_ca_system_score_gemma":0.00007471714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003920701,"about_ca_topic_score_gemma":0.00001466521,"domain_scores_codex":[0.9990167,0.00005279034,0.0002327266,0.0002103925,0.0003858565,0.0001015152],"domain_scores_gemma":[0.9992217,0.00006390873,0.0001539521,0.0001120756,0.0003970468,0.00005130196],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001989502,0.0002153593,0.01297667,0.0001369189,0.00006495856,0.000003111948,0.0005393851,0.0003745721,0.9781669,0.0000827305,0.00001676854,0.007223708],"study_design_scores_gemma":[0.002771454,0.001020437,0.05179714,0.0001054719,0.0006939226,0.00005977224,0.0008452507,0.007246863,0.9349337,0.0003485064,0.00007969073,0.00009774264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995507,0.00228533,0.000544915,0.0001743741,0.000119113,0.001272716,0.00006691286,0.000009660049,0.0000199696],"genre_scores_gemma":[0.9932671,0.000008976514,0.006340217,0.00002850599,0.00004941874,0.0002201476,0.0000691097,0.00001237203,0.000004135145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04323312,"threshold_uncertainty_score":0.3352746,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06275729516245286,"score_gpt":0.316215077253697,"score_spread":0.2534577820912441,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}