{"id":"W4309014292","doi":"10.1093/neuonc/noac209.472","title":"EPCO-38. TYPE B ULTRA LONG-RANGE INTERACTIONS IN PFAS (TULIPS) ARE RECURRENT EPIGENOMIC FEATURES OF PFA EPENDYMOMA","year":2022,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; Princess Margaret Cancer Centre; Université de Montréal; University of Calgary; McGill University; Centre Hospitalier Universitaire Sainte-Justine; University Health Network; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Biology; Epigenomics; Epigenetics; Ependymoma; Genome; Genetics; Bisulfite sequencing; Computational biology; DNA methylation; Gene; Pathology; Medicine; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007219525,0.0001889295,0.0001551974,0.0005310202,0.0002726301,0.0002990616,0.0001515378,0.000175346,0.002167323],"category_scores_gemma":[0.0002604503,0.00009489888,0.0001953349,0.0003826598,0.0001903097,0.0001327167,0.0003029835,0.0002988854,0.0004009391],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001817159,"about_ca_system_score_gemma":0.0001067721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001280168,"about_ca_topic_score_gemma":0.001921441,"domain_scores_codex":[0.9998797,0.000005323988,0.000009543843,0.00004374862,0.00003280516,0.00002886466],"domain_scores_gemma":[0.9998,0.00003162343,0.00006953,0.00002172288,0.00002302359,0.00005410165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000327461,0.0000243501,0.09024431,0.00006965123,0.00006622693,0.003251937,0.0001464128,0.0001571526,0.8956336,0.0001380028,0.0002888968,0.009651988],"study_design_scores_gemma":[0.00001271077,0.0001687169,0.8238531,0.00001617545,0.00008007338,0.01923583,0.0003699437,0.001176445,0.150161,0.0002594736,0.004653609,0.00001286182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968517,0.0003316965,0.001355384,0.00002124574,0.000004439728,0.00001204336,0.0007025324,0.00004713326,0.000673734],"genre_scores_gemma":[0.9979393,0.0001006427,0.0007403779,0.00001830543,0.000002570619,0.00001022349,0.0008123845,0.00001646632,0.0003597981],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002167323,"threshold_uncertainty_score":0.007250369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03514456935066453,"score_gpt":0.3296389742227801,"score_spread":0.2944944048721156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}