{"id":"W4309017992","doi":"10.1093/neuonc/noac209.618","title":"PATH-45. INTRAEPIGLIOM - RAPID SEQUENCING-BASED DIAGNOSIS OF BRAIN TUMORS","year":2022,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Nanopore sequencing; Minion; Medical diagnosis; Computer science; Brain biopsy; Classifier (UML); DNA sequencing; Medicine; Artificial intelligence; Pathology; Biopsy; Biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001446386,0.0007892212,0.0004015493,0.0009975216,0.0003001584,0.0006265112,0.0004847236,0.0007576928,0.00287957],"category_scores_gemma":[0.002161623,0.0003962291,0.0005199064,0.0003545337,0.0003425923,0.0002962425,0.000664854,0.0006363738,0.002044211],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000522628,"about_ca_system_score_gemma":0.0008261328,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00139692,"about_ca_topic_score_gemma":0.003105862,"domain_scores_codex":[0.9985967,0.0002592315,0.00009278156,0.00062798,0.0003098957,0.0001134086],"domain_scores_gemma":[0.9992663,0.0003217878,0.000127672,0.00008927779,0.0001383707,0.0000564992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002549609,0.0002270898,0.05128425,0.0005871706,0.0003163628,0.000490777,0.000310564,0.01382307,0.7196533,0.001383203,0.0108925,0.1984821],"study_design_scores_gemma":[0.0001841168,0.001231874,0.05950518,0.00009706595,0.0001841798,0.001643067,0.0000956809,0.2131739,0.6958805,0.002444452,0.0254307,0.0001294633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.575119,0.003212239,0.3618772,0.0008976717,0.0003190216,0.0008729435,0.02647054,0.0247962,0.006435304],"genre_scores_gemma":[0.4961095,0.0005111321,0.4774424,0.0008286612,0.00006541435,0.0008640836,0.01919138,0.0009158554,0.004071608],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.00287957,"threshold_uncertainty_score":0.009633064,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01373969604567659,"score_gpt":0.2567201268820625,"score_spread":0.2429804308363859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}