{"id":"W4309361392","doi":"10.1139/gen-2022-0055","title":"Complete genome analysis of <i>Pseudomonas furukawaii</i> ZS1 isolated from grass carp (<i>Ctenopharyngodon idellus</i>) culture water","year":2022,"lang":"en","type":"article","venue":"Genome","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Grass carp; Nitrate; Pseudomonas; Nitrite reductase; Nitrite; Gene; Genome; Metabolic pathway; Denitrification; Biochemistry; Genetics; Microbiology; Bacteria; Nitrogen; Chemistry; Ecology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011567,0.000629764,0.0005080838,0.0009713489,0.0003825728,0.0003916824,0.0002799141,0.0002624159,0.0007336522],"category_scores_gemma":[0.0002502968,0.0001556803,0.0006581089,0.001309434,0.0001554698,0.0002535496,0.0003433385,0.0004298202,0.0004209823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003573339,"about_ca_system_score_gemma":0.0006137646,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005999753,"about_ca_topic_score_gemma":0.003780126,"domain_scores_codex":[0.9998838,0.00000842479,0.0000105066,0.00003382115,0.00003892784,0.00002449068],"domain_scores_gemma":[0.9998649,0.00002409816,0.00003936508,0.0000106291,0.00003489044,0.00002600313],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002277121,0.00005809031,0.002133425,0.0002246671,0.00001610467,0.0002259038,0.0001042776,0.0002831318,0.9899154,0.00005110446,0.00009183778,0.006668391],"study_design_scores_gemma":[0.0001073786,0.001469119,0.4970081,0.0001326819,0.0005866736,0.003538505,0.001343604,0.005243832,0.4723383,0.0002859096,0.01782318,0.0001226961],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9805509,0.001082709,0.003185961,0.0001427918,0.00002115469,0.00007910221,0.01377443,0.00009376972,0.001069241],"genre_scores_gemma":[0.909998,0.002026434,0.01178357,0.00008962494,0.00002209688,0.0001430175,0.073669,0.0000920851,0.002176061],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005999753,"threshold_uncertainty_score":0.01192963,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009670674808548926,"score_gpt":0.2067065553452873,"score_spread":0.1970358805367384,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}