{"id":"W4309455063","doi":"10.3390/pathogens11111366","title":"Molecular Epidemiological Evidence Implicates Cattle as a Primary Reservoir of Campylobacter jejuni Infecting People via Contaminated Chickens","year":2022,"lang":"en","type":"article","venue":"Pathogens","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Chinook Regional Hospital; Alberta Health Services; Agriculture and Agri-Food Canada","funders":"Genome Alberta; Canadian Poultry Research Council","keywords":"Campylobacter jejuni; Campylobacteriosis; Biology; Feces; Transmission (telecommunications); Veterinary medicine; Campylobacter; Microbiology; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001830563,0.0002755437,0.0006948009,0.00003152799,0.000381948,0.00001462094,0.0006007078,0.0001609722,0.001204823],"category_scores_gemma":[0.001507254,0.0001278997,0.0003042523,0.0006908061,0.0001294886,0.00008803583,0.0007021985,0.0004130461,0.00004062942],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001043669,"about_ca_system_score_gemma":0.00002956315,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001353478,"about_ca_topic_score_gemma":0.0002950821,"domain_scores_codex":[0.9963408,0.001430643,0.0006525952,0.000661241,0.0002822623,0.0006324828],"domain_scores_gemma":[0.9963073,0.002765291,0.0003946663,0.0002241671,0.0001310727,0.0001774869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006590357,0.0001366977,0.3420796,0.00001360083,0.00002513753,0.00002172576,0.0001331369,0.00008325632,0.6537474,0.0002126138,0.0001584844,0.00332244],"study_design_scores_gemma":[0.0001503096,0.00104823,0.9863435,0.00002389164,0.00004493631,0.0002227262,0.0003613089,0.0001082717,0.006914801,0.002283264,0.002158731,0.0003400549],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956613,0.0009871721,0.00002949225,0.001810325,0.0001492394,0.0003883942,0.0001294447,0.0001090995,0.0007355543],"genre_scores_gemma":[0.9977412,0.0001089374,0.00009707197,0.001527496,0.00008830521,0.0001461582,0.0002290974,0.000003805425,0.00005793714],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6468326,"threshold_uncertainty_score":0.9997082,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02994195581455495,"score_gpt":0.2603775101243228,"score_spread":0.2304355543097678,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}