{"id":"W4309474916","doi":"10.1016/j.virol.2022.10.012","title":"Expansion of viral genomes with viral protein genome linked copies","year":2022,"lang":"en","type":"article","venue":"Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Life Sciences Institute","keywords":"Genome; Biology; Genetics; Virus; Computational biology; Viral replication; Metagenomics; Gene; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003604835,0.0002339319,0.0003907457,0.001254795,0.0003583348,0.0006582813,0.0002198068,0.0003856228,0.001407002],"category_scores_gemma":[0.0009291317,0.0002774907,0.0006615159,0.001160522,0.0002529224,0.0004657684,0.0006205784,0.0005768294,0.0004374093],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004673103,"about_ca_system_score_gemma":0.0003303615,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007105867,"about_ca_topic_score_gemma":0.001329766,"domain_scores_codex":[0.9996372,0.00003804194,0.0000264161,0.0001609803,0.0001011392,0.00003607872],"domain_scores_gemma":[0.9993854,0.0002091804,0.0001966817,0.00008318415,0.00005994719,0.00006558717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004374643,0.00007326993,0.1183355,0.0004543946,0.0002547042,0.0007304068,0.0003365647,0.003092838,0.8342798,0.001336396,0.0004105231,0.04025811],"study_design_scores_gemma":[0.00005892157,0.0006507035,0.6431089,0.0001684676,0.0005611796,0.006519378,0.0007392708,0.04287537,0.273861,0.005393344,0.02594337,0.0001202254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836821,0.001008861,0.0116347,0.00005273552,0.00001526423,0.00003254963,0.002077034,0.0002357661,0.001261103],"genre_scores_gemma":[0.9741013,0.0003977276,0.01957146,0.00007144124,0.00001067928,0.00002695983,0.005139589,0.0000497092,0.0006309846],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001407002,"threshold_uncertainty_score":0.00470686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02325098351353142,"score_gpt":0.2294384209541536,"score_spread":0.2061874374406222,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}