{"id":"W4309517453","doi":"10.1111/tbed.14759","title":"Screen the unforeseen: Microbiome‐profiling for detection of zoonotic pathogens in wild rats","year":2022,"lang":"en","type":"article","venue":"Transboundary and Emerging Diseases","topic":"Bartonella species infections research","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Newfoundland and Labrador; European Commission","keywords":"Biology; Amplicon; Microbiome; Hypervariable region; Leptospira; 16S ribosomal RNA; Polymerase chain reaction; DNA sequencing; Sanger sequencing; Microbiology; Virology; Genetics; Leptospirosis; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003918919,0.000504414,0.000398719,0.000596276,0.0002433755,0.0004560304,0.0001854744,0.0002839272,0.0007831234],"category_scores_gemma":[0.0004315965,0.0001611867,0.0003132827,0.0003056111,0.0002425305,0.0002438112,0.0003287701,0.0002576967,0.0002713406],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001006827,"about_ca_system_score_gemma":0.0002123714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001044407,"about_ca_topic_score_gemma":0.002556683,"domain_scores_codex":[0.9997148,0.00005739931,0.00001579981,0.00009836646,0.00006666207,0.00004697729],"domain_scores_gemma":[0.9996995,0.00004278571,0.0001068104,0.00002766313,0.00005982528,0.00006347376],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002999606,0.00007606806,0.07359931,0.0001000859,0.00006400542,0.0000927955,0.0001171074,0.0001213783,0.9163792,0.00002870076,0.00005922938,0.009062187],"study_design_scores_gemma":[0.00001807001,0.001915385,0.7342214,0.00004295273,0.0002669127,0.0007118987,0.0004927251,0.002302001,0.2580995,0.0001305383,0.001759328,0.00003932868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955177,0.0003276764,0.003229687,0.00002418671,0.000006960468,0.00002793941,0.0005730097,0.00005262228,0.0002401551],"genre_scores_gemma":[0.9836783,0.0006057873,0.01346249,0.0001179924,0.00001251098,0.00008094124,0.001237678,0.00003095841,0.0007732824],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001044407,"threshold_uncertainty_score":0.002619803,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01296003231350066,"score_gpt":0.2549380819081633,"score_spread":0.2419780495946627,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}