{"id":"W4309639778","doi":"10.1007/s00335-022-09967-8","title":"Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness","year":2022,"lang":"en","type":"article","venue":"Mammalian Genome","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Javna Agencija za Raziskovalno Dejavnost RS","keywords":"Biology; Single-nucleotide polymorphism; Genetics; Gene; DNA microarray; Genome; Genotype; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004061759,0.0001323801,0.000152447,0.00020111,0.0002034127,0.00004419421,0.0001403974,0.00007458794,0.00002408827],"category_scores_gemma":[0.00008256886,0.0001535017,0.00004667819,0.0001854737,0.00002403949,0.000009068631,0.000109856,0.0001012953,4.217453e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004887984,"about_ca_system_score_gemma":0.00005263525,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008869704,"about_ca_topic_score_gemma":0.0004718623,"domain_scores_codex":[0.9987881,0.00007813977,0.0002425432,0.0003883744,0.0001135476,0.000389336],"domain_scores_gemma":[0.9996593,0.00004188256,0.00006174695,0.0001145782,0.00005428905,0.00006820985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004544257,0.00004133739,0.06435217,0.0000528322,0.00001571039,0.000003850381,0.000101609,0.01451233,0.9187128,0.000008602134,0.00001222588,0.00173212],"study_design_scores_gemma":[0.006044966,0.002083639,0.795026,0.00002202101,0.00002581608,0.00004902629,0.001058959,0.05253681,0.1347118,0.0002845259,0.007248722,0.0009076992],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9639922,0.0005334714,0.03443663,0.0001626768,0.00002293724,0.0007462513,0.00009042313,0.000007637474,0.000007827262],"genre_scores_gemma":[0.9938337,0.00002532202,0.003215706,0.00009837327,0.0001684565,0.0003983644,0.0004160938,0.00003351556,0.001810419],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.784001,"threshold_uncertainty_score":0.6259618,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02345249999933357,"score_gpt":0.2638615228595331,"score_spread":0.2404090228601996,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}