{"id":"W4309639778","doi":"10.1007/s00335-022-09967-8","title":"Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness","year":2022,"lang":"en","type":"article","venue":"Mammalian Genome","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Javna Agencija za Raziskovalno Dejavnost RS","keywords":"Biology; Single-nucleotide polymorphism; Genetics; Gene; DNA microarray; Genome; Genotype; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000608262,0.0005517062,0.0006065958,0.001209276,0.000326678,0.0003204211,0.0003221231,0.0004655398,0.001950295],"category_scores_gemma":[0.0003926829,0.000334584,0.0007622496,0.0009627366,0.0002493754,0.00006854565,0.000343404,0.0006122739,0.0004048182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001671547,"about_ca_system_score_gemma":0.0002086019,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007140199,"about_ca_topic_score_gemma":0.002129451,"domain_scores_codex":[0.9993404,0.00007968133,0.00006365206,0.0002651188,0.0001715553,0.0000796593],"domain_scores_gemma":[0.9995079,0.0001543265,0.000146725,0.00004931222,0.00005482243,0.00008695707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006341749,0.0001077935,0.01099064,0.00007420665,0.0001735552,0.0003755754,0.000068138,0.0001904668,0.9832717,0.00008951934,0.000186501,0.003837814],"study_design_scores_gemma":[0.0004023566,0.001995264,0.7195235,0.00004814017,0.001703453,0.004105613,0.0001523995,0.004513835,0.2550612,0.0002232239,0.01219606,0.00007489898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881344,0.0005106696,0.006571811,0.00004804561,0.00001837514,0.0001491,0.003803997,0.0001539779,0.0006095957],"genre_scores_gemma":[0.9609836,0.0007208275,0.01444988,0.0002923984,0.00002552901,0.0005222373,0.01892362,0.0003076332,0.003774249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001950295,"threshold_uncertainty_score":0.006524384,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02345249999933357,"score_gpt":0.2638615228595331,"score_spread":0.2404090228601996,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}