{"id":"W4309725898","doi":"10.1016/j.fm.2022.104192","title":"Heightened variability observed in resistance and virulence genes across salmonella Kentucky isolates from poultry environments in British Columbia, Canada","year":2022,"lang":"en","type":"article","venue":"Food Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Salmonella; Serotype; Virulence; Salmonella enterica; Biology; Antibiotic resistance; Plasmid; Pathogenicity island; Microbiology; Gene; Genetics; Bacteria; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000483281,0.0003034654,0.0004458255,0.001847746,0.003269613,0.00164884,0.000816619,0.0004294702,0.001061881],"category_scores_gemma":[0.001606068,0.0003284414,0.0002455811,0.002766739,0.0009776433,0.0002734233,0.0009056191,0.0005888464,0.0001718609],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01282299,"about_ca_system_score_gemma":0.01029948,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9844797,"about_ca_topic_score_gemma":0.9949225,"domain_scores_codex":[0.9987773,0.0001039634,0.00007929034,0.0003044476,0.0003362352,0.0003987633],"domain_scores_gemma":[0.9977816,0.000171148,0.0002573583,0.00006516955,0.001327278,0.0003974434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002247819,0.00004942236,0.9790446,0.00004550852,0.00006904353,0.0002921805,0.003409429,0.0001283931,0.009103431,0.00008891393,0.0005943151,0.006949994],"study_design_scores_gemma":[0.000001339141,0.00001348989,0.9970474,0.00001150465,0.000008084747,0.00004377481,0.002309619,0.00004525798,0.0001706053,0.00000588211,0.0003382747,0.000004776164],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970199,0.0002261091,0.0001248615,0.00008003841,0.000006607893,0.00001999543,0.0008143614,0.000005275718,0.001702777],"genre_scores_gemma":[0.9981674,0.0001661699,0.0001429237,0.00006642851,0.000001978766,0.000009168511,0.000537156,0.000004823478,0.0009039624],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01552027,"threshold_uncertainty_score":0.09303784,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01305304996974193,"score_gpt":0.1809584964562483,"score_spread":0.1679054464865064,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}