{"id":"W4310062946","doi":"10.1038/s41396-022-01343-3","title":"The ColR/S two-component system is a conserved determinant of host association across <i>Pseudomonas</i> species","year":2022,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Killam Trusts; National Science Foundation; Government of Canada; Michael Smith Health Research BC","keywords":"Biology; Host (biology); Component (thermodynamics); Association (psychology); Pseudomonas; Pseudomonas aeruginosa; Ecology; Genetics; Evolutionary biology; Bacteria; Epistemology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.001933978,0.0001067813,0.0002079284,0.000003955334,0.002660979,0.0001280499,0.0005421211,0.00002410357,0.0000699929],"category_scores_gemma":[0.00004994012,0.00002952274,0.0001565001,0.0001525143,0.00007689502,0.0000493432,0.0003104735,0.0002723147,0.000007478598],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002008352,"about_ca_system_score_gemma":0.00001616189,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009677446,"about_ca_topic_score_gemma":0.00029479,"domain_scores_codex":[0.9982672,0.000449442,0.0003640035,0.0001058192,0.0004968501,0.0003167253],"domain_scores_gemma":[0.9984213,0.0007773103,0.0006031012,0.00006271894,0.00009580762,0.00003983655],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009368263,0.0000409056,0.009850034,0.000003920507,0.00009573873,0.00001654711,0.00111045,0.000003764752,0.9814849,0.00007982494,0.005696919,0.001523323],"study_design_scores_gemma":[0.0007521537,0.0004189754,0.7614074,0.00006000241,0.00009476771,0.001153633,0.02584384,0.0001417316,0.03105029,0.0001196366,0.1786731,0.0002844096],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905066,0.0004475259,5.138427e-7,0.007566608,0.0006117026,0.0001536912,0.000495183,0.00001526209,0.0002029182],"genre_scores_gemma":[0.9984334,0.0002165626,0.0000057039,0.0002067173,0.0002681231,0.00001711998,0.000004286146,9.053654e-7,0.000847246],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9504346,"threshold_uncertainty_score":0.9986374,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01789431288961074,"score_gpt":0.2139574110885284,"score_spread":0.1960630981989176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}