{"id":"W4310551922","doi":"10.1093/jacamr/dlac122","title":"Antimicrobial resistance patterns of bacterial pathogens recovered from the urine of patients at Canadian hospitals from 2009 to 2020","year":2022,"lang":"en","type":"article","venue":"JAC-Antimicrobial Resistance","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Manitoba Health","funders":"South East Regional Health Authority; Jewish General Hospital; Public Health Agency; University of Alberta; Public Health Agency of Canada; University of Manitoba; London Health Sciences Centre; Hamilton Health Sciences","keywords":"Ciprofloxacin; Proteus mirabilis; Microbiology; Broth microdilution; Sulfamethoxazole; Nitrofurantoin; Medicine; Antimicrobial; Trimethoprim; Enterococcus faecalis; Klebsiella pneumoniae; Ertapenem; Urine; Outpatient clinic; Pseudomonas aeruginosa; Enterococcus; Staphylococcus aureus; Meropenem; Antibiotic resistance; Biology; Escherichia coli; Antibiotics; Internal medicine; Minimum inhibitory concentration; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002922523,0.000393259,0.000783994,0.0002163012,0.0004467059,0.00003781351,0.0006396772,0.0001100724,0.003239674],"category_scores_gemma":[0.0002537816,0.0003857249,0.0003138866,0.0006539981,0.0001054674,0.0001232887,0.0004671266,0.000354234,0.00005279472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009534206,"about_ca_system_score_gemma":0.0003547256,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.04750841,"about_ca_topic_score_gemma":0.1942869,"domain_scores_codex":[0.9966916,0.000272498,0.001028573,0.0008004993,0.0005886807,0.0006180812],"domain_scores_gemma":[0.9972689,0.0002188287,0.0006377235,0.001310236,0.0002769288,0.000287413],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.007364352,0.001935045,0.2581925,0.0002465061,0.0007290427,0.0002535678,0.001176814,0.0001272196,0.2334564,0.00004006704,0.4961546,0.0003238218],"study_design_scores_gemma":[0.003025886,0.0005214244,0.6614502,0.0004243049,0.0003680999,0.000004122038,0.00008380837,0.000001918966,0.02371972,0.00002092336,0.3098955,0.0004840696],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9456885,0.0001367485,0.00003594382,0.003245413,0.001405008,0.001462857,0.04706382,0.0000393247,0.0009223358],"genre_scores_gemma":[0.988343,0.0001183611,0.00165129,0.00172767,0.000342614,0.00006680312,0.003377339,0.00008454999,0.004288348],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4032577,"threshold_uncertainty_score":0.9998595,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006879963295214671,"score_gpt":0.2098697721681099,"score_spread":0.2029898088728952,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}