{"id":"W4310999256","doi":"10.1186/s12862-022-02091-w","title":"Evolution of the connectivity and indispensability of a transferable gene: the simplicity hypothesis","year":2022,"lang":"en","type":"article","venue":"BMC Ecology and Evolution","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Gordon and Betty Moore Foundation","keywords":"Coevolution; Horizontal gene transfer; Biology; Gene; Gene product; Population; Genetics; Function (biology); Evolutionary biology; Gene expression; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005308998,0.00007552135,0.0001187579,0.00002132127,0.0003396694,0.000002044939,0.0001150054,0.00009119489,0.00001512289],"category_scores_gemma":[0.0001620779,0.00005577387,0.00006089645,0.0001051122,0.0003912089,0.000002968616,0.0001531912,0.00009934112,1.620551e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004799631,"about_ca_system_score_gemma":0.0001222561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001358669,"about_ca_topic_score_gemma":0.001580861,"domain_scores_codex":[0.9990339,0.0003937595,0.0001730945,0.0001978908,0.00007901291,0.0001224029],"domain_scores_gemma":[0.9995196,0.00008162311,0.00009498374,0.000235818,0.00004639075,0.00002155859],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001680916,0.0001163775,0.8344671,0.00003268997,0.00003250419,3.484907e-8,0.00008940066,0.002878709,0.1588371,0.003159686,0.00009627788,0.0001220654],"study_design_scores_gemma":[0.0003670681,0.0002219168,0.9884862,0.000001168724,0.00003851974,0.00002178556,0.0002535735,0.002923726,0.003759671,0.003744066,0.0001213467,0.00006101684],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955929,0.0005401425,0.00317413,0.0001820079,0.00009410475,0.0002628274,0.00005973435,0.000003358493,0.00009082269],"genre_scores_gemma":[0.9996476,0.0000386551,0.0001269758,0.00004619218,0.00001818689,0.00003136039,0.000006125427,0.000004466152,0.00008042693],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1550774,"threshold_uncertainty_score":0.2612496,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008333336779822067,"score_gpt":0.2064618549659082,"score_spread":0.1981285181860862,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}