{"id":"W4311129186","doi":"10.1099/jgv.0.001807","title":"ICTV Virus Taxonomy Profile: Secoviridae 2022","year":2022,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Virus classification; Genome; Virology; Taxonomy (biology); Phylogenetics; Plant virus; Virus; Evolutionary biology; Genetics; Gene; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005368584,0.0001193371,0.000293217,0.00004765159,0.0004578014,0.00002204809,0.0005111605,0.00004701516,0.00566156],"category_scores_gemma":[0.00007328849,0.00004692323,0.0001503145,0.0002754124,0.00008031069,0.000101736,0.0004109903,0.000548116,0.00002979114],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008349022,"about_ca_system_score_gemma":0.00002908884,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009903072,"about_ca_topic_score_gemma":0.0001511491,"domain_scores_codex":[0.9982871,0.0003999726,0.0003604978,0.0001654333,0.0004169755,0.0003700537],"domain_scores_gemma":[0.9992905,0.0001792566,0.0002872014,0.00004297117,0.00008038088,0.0001196713],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002254118,0.00009927961,0.001085872,0.000001452475,0.00005556265,0.0002050971,0.0000182174,0.00008731089,0.8889849,0.00005086953,0.0936428,0.01554324],"study_design_scores_gemma":[0.0002790982,0.001827069,0.03627386,0.000001246075,0.00001403615,0.0005665629,0.0001040421,0.00008519387,0.009692382,0.0001966964,0.9508247,0.0001350893],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938936,0.0009327078,0.000003007521,0.003327735,0.0004267766,0.0001494149,0.0003317456,0.0000113357,0.0009237282],"genre_scores_gemma":[0.9930923,0.0005347304,0.0002344574,0.002142429,0.001458694,0.00009186742,0.00004368629,0.000001826192,0.002400025],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8792925,"threshold_uncertainty_score":0.9952474,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04239273899671859,"score_gpt":0.2516673991854366,"score_spread":0.209274660188718,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}