{"id":"W4311285997","doi":"10.7326/m22-2699","title":"Monkeypox in Montréal: Epidemiology, Phylogenomics, and Public Health Response to a Large North American Outbreak","year":2022,"lang":"en","type":"article","venue":"Annals of Internal Medicine","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Jewish General Hospital; Public Health Agency of Canada; Cegep de Saint Jerome; Ste. Anne's Hospital; Centre Hospitalier de l’Université de Montréal; McGill University; University of Manitoba; Institut National de Santé Publique du Québec; Clinique Paro Excellence; Université de Montréal; McGill University Health Centre","funders":"","keywords":"Monkeypox; Outbreak; Medicine; Context (archaeology); Public health; Orthopoxvirus; Epidemiology; Demography; Virology; Vaccinia; Geography; Biology; Pathology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006408466,0.0002993282,0.000170701,0.001005017,0.001007407,0.0007728191,0.0007943939,0.0004491401,0.001579041],"category_scores_gemma":[0.001875806,0.0001331306,0.0002238379,0.001333763,0.0007100824,0.0003363541,0.0006638242,0.0004354037,0.00008991456],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01054468,"about_ca_system_score_gemma":0.005945537,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8537111,"about_ca_topic_score_gemma":0.8571486,"domain_scores_codex":[0.9995618,0.00008831992,0.000008679064,0.00006521856,0.00007498646,0.0002009316],"domain_scores_gemma":[0.9989709,0.00008016734,0.0003198536,0.00003406751,0.0002675037,0.0003275695],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001206684,0.00004455253,0.9861467,0.00004320795,0.00007052304,0.0003588755,0.000627073,0.0005109562,0.001308466,0.0001652696,0.002519586,0.008084069],"study_design_scores_gemma":[0.000003511465,0.00001889066,0.9983702,0.00001192181,0.000006006094,0.00004991686,0.0004477765,0.0002538653,0.00004354287,0.00002337252,0.0007664473,0.000004583073],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911656,0.001322286,0.0002861955,0.002355537,0.00001864868,0.00008838943,0.001923702,0.00002840687,0.002811249],"genre_scores_gemma":[0.9975419,0.0006067266,0.0003232368,0.0003375701,0.0000220628,0.00002025021,0.0007535515,0.00000471099,0.0003899519],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1462889,"threshold_uncertainty_score":0.2943007,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07374941407560241,"score_gpt":0.3677557204807102,"score_spread":0.2940063064051078,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}