{"id":"W4311392158","doi":"10.7554/elife.82193","title":"The regional distribution of resident immune cells shapes distinct immunological environments along the murine epididymis","year":2022,"lang":"en","type":"article","venue":"eLife","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; Ted Rogers Centre for Heart Research; University Health Network","funders":"Deutsche Forschungsgemeinschaft","keywords":"Epididymis; Efferent ducts; Biology; Immune system; Transcriptome; Inflammation; Flow cytometry; Sperm; Immunity; Immunology; Cell biology; Gene; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005054689,0.000092708,0.000138806,0.00001240091,0.0005086075,0.000008337759,0.0001431757,0.0000282981,0.0005065396],"category_scores_gemma":[0.0002298552,0.00005008471,0.00011639,0.0001031048,0.0001822654,0.00002333801,0.0001787759,0.0002375827,0.00002814009],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001116621,"about_ca_system_score_gemma":0.00003029128,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001519384,"about_ca_topic_score_gemma":0.000004232878,"domain_scores_codex":[0.998755,0.0001393199,0.0002781867,0.0001544975,0.000509875,0.0001631246],"domain_scores_gemma":[0.9992607,0.0002744473,0.0001304291,0.0002791946,0.00002128842,0.00003392051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007090572,0.003755693,0.2624377,0.0001489269,0.001823258,0.0005272143,0.001825304,0.001681563,0.5695577,0.01762738,0.08434775,0.04917696],"study_design_scores_gemma":[0.000604208,0.0003199803,0.8663551,0.00001412933,0.00008136962,0.00008358894,0.0003663634,0.0002353568,0.009237858,0.00007573154,0.1225622,0.0000641755],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917682,0.003868412,0.0003155619,0.003313051,0.0002393568,0.0002892021,0.00002613916,0.00002243676,0.0001576292],"genre_scores_gemma":[0.9980546,0.0003849325,0.00001289227,0.0001407353,0.0001126547,0.00005940918,0.0001728869,0.00000833002,0.001053612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6039174,"threshold_uncertainty_score":0.5546253,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01634466072576928,"score_gpt":0.2305503536541745,"score_spread":0.2142056929284052,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}