{"id":"W4311436484","doi":"10.17504/protocols.io.bp2l692prlqe/v1","title":"Whole blood T cell assay for NHPs, containment protocol v1","year":2022,"lang":"en","type":"preprint","venue":"","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Protocol (science); Bronchoalveolar lavage; Immunology; Antibody; Medicine; Computer science; Pathology; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001957129,0.00301323,0.0011697,0.002756849,0.001816067,0.001375774,0.002460703,0.00120862,0.09610609],"category_scores_gemma":[0.002339017,0.0009770311,0.001000138,0.00188828,0.000661253,0.0006984949,0.001400412,0.003884646,0.08081934],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007886942,"about_ca_system_score_gemma":0.002205953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003721046,"about_ca_topic_score_gemma":0.008776267,"domain_scores_codex":[0.9975073,0.0004325455,0.0001971098,0.0006061821,0.0009779966,0.0002788351],"domain_scores_gemma":[0.9985402,0.0001647957,0.00007586551,0.0003644362,0.0006752997,0.0001795167],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00167255,0.000641052,0.002371506,0.001791187,0.00009652093,0.0009345477,0.0006566804,0.0007798207,0.7512072,0.005139096,0.1657158,0.06899416],"study_design_scores_gemma":[0.0002827625,0.001139977,0.008814165,0.0005170385,0.0001638087,0.00211677,0.0002364107,0.001337348,0.2571992,0.002429731,0.7256613,0.0001014428],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.05320449,0.01033316,0.4182093,0.001957333,0.004714814,0.03061452,0.1854087,0.01796051,0.2775972],"genre_scores_gemma":[0.06936916,0.00671952,0.235603,0.002558943,0.001222965,0.0355866,0.3756128,0.003378078,0.269949],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.09610609,"threshold_uncertainty_score":0.3215069,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01624759674673222,"score_gpt":0.2723489456211179,"score_spread":0.2561013488743857,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}