{"id":"W4311453671","doi":"10.3168/jds.2022-22223","title":"Genome-wide association study for milk production and conformation traits in Canadian Alpine and Saanen dairy goats","year":2022,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Agri-Food Innovation Alliance; Trent University; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Udder; Genome-wide association study; Biology; Candidate gene; Breed; Lactation; Genetic architecture; Quantitative trait locus; Single-nucleotide polymorphism; Genetic association; Animal science; Genetics; Genotype; Gene; Mastitis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008824722,0.0003184525,0.0003844859,0.00156793,0.001528517,0.0006197043,0.0006127678,0.000383646,0.001131653],"category_scores_gemma":[0.001105297,0.0001958946,0.0007380384,0.002184411,0.0006446769,0.0001415904,0.0004486987,0.0003694008,0.00007540717],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00252427,"about_ca_system_score_gemma":0.003353069,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.813933,"about_ca_topic_score_gemma":0.9043991,"domain_scores_codex":[0.9992006,0.00008543696,0.00004612198,0.0002911542,0.0002035368,0.0001731007],"domain_scores_gemma":[0.9990674,0.0002156607,0.0001704232,0.00009188262,0.000265253,0.0001894087],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002191779,0.00002115521,0.9901574,0.00002247753,0.0004450252,0.0002181611,0.0004866536,0.0001455435,0.004975764,0.0001210667,0.0002646227,0.002922944],"study_design_scores_gemma":[0.000004406682,0.000008109528,0.9993778,0.000002865722,0.0000557737,0.00003578654,0.0001085203,0.000147199,0.00004936853,0.000007170132,0.0002001503,0.000002707354],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985269,0.0001951771,0.0001670158,0.00005385281,0.000002980615,0.000007401843,0.0005672722,0.000006498191,0.0004727445],"genre_scores_gemma":[0.9983681,0.0001168948,0.0004153769,0.00002842991,0.000003574757,0.00001007786,0.0006860111,0.000005374766,0.0003661728],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.186067,"threshold_uncertainty_score":0.3743256,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01038309926701459,"score_gpt":0.24106716672542,"score_spread":0.2306840674584054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}