{"id":"W4311777770","doi":"10.1016/j.bbrc.2022.12.022","title":"IRES-mediated translation in bacteria","year":2022,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada; Carleton University; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Carleton University; Johns Hopkins University","keywords":"Internal ribosome entry site; Translation (biology); Eukaryotic translation; Ribosome; Biology; Eukaryotic translation initiation factor 4 gamma; Cell biology; Initiation factor; Computational biology; RNA; Genetics; Messenger RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007528275,0.0006604682,0.0009533114,0.0005683705,0.0005209355,0.0008766873,0.0003990134,0.0008730976,0.001241674],"category_scores_gemma":[0.0005477105,0.0003652389,0.0005781212,0.0003276333,0.0005873064,0.0005983333,0.0004758144,0.001899851,0.001400905],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001873848,"about_ca_system_score_gemma":0.0006056317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001514583,"about_ca_topic_score_gemma":0.000849999,"domain_scores_codex":[0.999469,0.0001325049,0.00004183918,0.0001049584,0.000139099,0.0001127513],"domain_scores_gemma":[0.9997775,0.00007148174,0.00003685004,0.00003653183,0.00003939589,0.00003821259],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005442335,0.0001526957,0.0003159876,0.0003796104,0.00002666246,0.000195965,0.00009970718,0.001919332,0.9776554,0.005857616,0.00119915,0.01165352],"study_design_scores_gemma":[0.00006829864,0.000225374,0.001014767,0.00005141572,0.00001921111,0.0001618365,0.00004864629,0.008636526,0.9785487,0.001400905,0.009793543,0.00003075638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9306484,0.01825193,0.02915064,0.001846164,0.0008806299,0.0002295432,0.001209616,0.00260649,0.01517651],"genre_scores_gemma":[0.9639545,0.004038637,0.02067416,0.0002464078,0.00009461584,0.0001240627,0.001376451,0.0002409124,0.009250203],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001873848,"threshold_uncertainty_score":0.01359582,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08188195616415075,"score_gpt":0.3532980702422355,"score_spread":0.2714161140780847,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}