{"id":"W4311927976","doi":"10.1128/mbio.02878-22","title":"Population Genomics Provide Insights into the Global Genetic Structure of <i>Colletotrichum graminicola</i> , the Causal Agent of Maize Anthracnose","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Ministry of Agriculture, Food and Rural Affairs","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Ministerio de Ciencia e Innovación; Center for Gastrointestinal Biology and Disease, School of Medicine, University of North Carolina at Chapel Hill; Nutrition Obesity Research Center, University of North Carolina; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Commission; Consejería de Educación, Junta de Castilla y León; Agencia Estatal de Investigación; Junta de Castilla y León; U.S. Department of Agriculture","keywords":"Biology; Genomics; Population; Population genomics; Mycosphaerella graminicola; Biotechnology; Evolutionary biology; Computational biology; Genetics; Genome; Pathogen; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003328406,0.0003510169,0.0001958995,0.0005436823,0.0002065924,0.000576745,0.0002515559,0.0005478914,0.002127453],"category_scores_gemma":[0.0003923682,0.0001561842,0.0003127682,0.000583017,0.0001974527,0.0005014911,0.0003427227,0.0007992731,0.0005443819],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00045196,"about_ca_system_score_gemma":0.00022145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001597001,"about_ca_topic_score_gemma":0.00381158,"domain_scores_codex":[0.9998901,0.00001780807,0.00000395098,0.00004752143,0.00002073173,0.00001985821],"domain_scores_gemma":[0.9997812,0.000088227,0.00006551042,0.00001852576,0.00002236407,0.00002406514],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001657302,0.0001360919,0.02502176,0.0002304177,0.0002521724,0.0002874971,0.00039299,0.004775337,0.8990612,0.01103947,0.001278351,0.05735895],"study_design_scores_gemma":[0.000101664,0.0004534577,0.742249,0.0001545195,0.0005812229,0.001991636,0.0009633444,0.02770867,0.09688307,0.03952344,0.08925011,0.0001398976],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.902283,0.003127497,0.0694823,0.001110134,0.00007893054,0.0000475281,0.00534142,0.0004955895,0.01803361],"genre_scores_gemma":[0.9781567,0.002018224,0.01283975,0.0004991265,0.00004680137,0.00004283115,0.003282431,0.0001295108,0.002984669],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002127453,"threshold_uncertainty_score":0.007116973,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005558433193249931,"score_gpt":0.2170610666670638,"score_spread":0.2115026334738139,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}