{"id":"W4312052305","doi":"10.1016/j.lana.2022.100411","title":"Infectious diseases genomic surveillance capacity in the Caribbean: a retrospective analysis of SARS-CoV-2","year":2022,"lang":"en","type":"article","venue":"The Lancet Regional Health - Americas","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; University of Toronto; Cegep de Matane","funders":"","keywords":"Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Caribbean region; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty); Political science; Latin Americans; Internal medicine; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004667722,0.0001216121,0.0003924637,0.00007961464,0.000258605,0.00001036106,0.000407556,0.00002147423,0.000006969839],"category_scores_gemma":[0.00003804292,0.0000830566,0.0001983664,0.0006782247,0.0002089433,0.000001769249,0.0001340473,0.0001666088,8.794352e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001097924,"about_ca_system_score_gemma":0.0002015892,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00213164,"about_ca_topic_score_gemma":0.001089828,"domain_scores_codex":[0.9984713,0.0005100105,0.0002356882,0.000282245,0.0002188829,0.000281827],"domain_scores_gemma":[0.9990763,0.00005693945,0.0002583936,0.0005281527,0.00004555147,0.00003467144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006303984,0.0006144833,0.9444939,0.00006462347,0.001117948,0.00001970763,0.002306326,0.007296589,0.008732068,0.002055744,0.03132703,0.001341168],"study_design_scores_gemma":[0.0003784673,0.0003300461,0.9747251,0.000002363809,0.00007277744,0.00002953071,0.0004424681,0.0002917761,0.00003861023,0.0003852255,0.0231682,0.0001354903],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930202,0.001795035,0.00004900742,0.003994673,0.00006037959,0.0002433354,0.0006750546,0.000007316224,0.0001549777],"genre_scores_gemma":[0.9922176,0.0006892476,0.00001539392,0.006557608,0.000157616,0.00008088955,0.000260956,0.00001056681,0.00001014639],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03023113,"threshold_uncertainty_score":0.338695,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05858605976582264,"score_gpt":0.3243190846800434,"score_spread":0.2657330249142207,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}