{"id":"W4312181086","doi":"10.1038/s41598-022-26838-z","title":"AmiA and AliA peptide ligands are secreted by Klebsiella pneumoniae and inhibit growth of Streptococcus pneumoniae","year":2022,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Bern; Universitair Medisch Centrum Utrecht; York University; Centre Hospitalier Universitaire Vaudois; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Klebsiella pneumoniae; Streptococcus pneumoniae; Peptide; Microbiology; Permease; Biology; Peptide sequence; Biochemistry; Enterobacteriaceae; Escherichia coli; Gene; Antibiotics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001471472,0.000379087,0.0003478578,0.0001649937,0.0001548344,0.0002757031,0.0001460828,0.0003260728,0.001405847],"category_scores_gemma":[0.0003523788,0.0001330625,0.0001895514,0.0001657073,0.0001493812,0.0001477056,0.0002458369,0.0003559386,0.0004521738],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001470179,"about_ca_system_score_gemma":0.0002275208,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005100649,"about_ca_topic_score_gemma":0.0009167268,"domain_scores_codex":[0.9997604,0.00004734763,0.00002600532,0.00002432468,0.00009104015,0.00005086329],"domain_scores_gemma":[0.9998318,0.00004565974,0.00002924013,0.00001093214,0.00002365439,0.00005872782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004390506,0.00007989039,0.0006003589,0.0000598089,0.000008277374,0.00006262279,0.00001439562,0.0001038364,0.9960003,0.00002189947,0.00004763336,0.002561714],"study_design_scores_gemma":[0.00008039148,0.002542989,0.03338587,0.00001887359,0.00002373238,0.0007113734,0.00006648912,0.001234978,0.9588406,0.00005943608,0.003018913,0.00001631431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952896,0.002367903,0.0006319078,0.00008084116,0.00002702794,0.00002748049,0.0003056695,0.00002954486,0.001240085],"genre_scores_gemma":[0.9945551,0.0008316672,0.002048627,0.0001165906,0.00002176925,0.00005245416,0.0008596056,0.00001262827,0.001501411],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001405847,"threshold_uncertainty_score":0.004702985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007558024382225962,"score_gpt":0.228394865815993,"score_spread":0.2208368414337671,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}