{"id":"W4312876952","doi":"10.1063/4.0000171","title":"Solution characterization of the dynamic conjugative entry exclusion protein TraG","year":2022,"lang":"en","type":"article","venue":"Structural Dynamics","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Argonne National Laboratory; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; York University; Natural Sciences and Engineering Research Council of Canada; Johns Hopkins University; U.S. Department of Energy","keywords":"Periplasmic space; Plasmid; Secretion; Bacteria; Biology; Biophysics; Chemistry; DNA; Biochemistry; Escherichia coli; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006132366,0.0001093106,0.00009967523,0.00002690418,0.0002243658,0.000007129268,0.0002656066,0.0001126849,0.00003397607],"category_scores_gemma":[0.00001438901,0.00008618674,0.00007030225,0.000129735,0.000116678,0.000002500361,0.0004632891,0.0001401599,3.174681e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005765634,"about_ca_system_score_gemma":0.00005143549,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001230425,"about_ca_topic_score_gemma":0.00005116139,"domain_scores_codex":[0.9992512,0.00008452143,0.0001819078,0.0002079255,0.0001256455,0.0001488339],"domain_scores_gemma":[0.999494,0.000001543455,0.0001841217,0.0002547247,0.00004735851,0.00001827442],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006923436,0.000009371503,0.000275296,0.000008839927,0.00001439254,2.287581e-7,0.00002796428,0.00003409255,0.9926657,0.0007054483,0.00000373863,0.006185698],"study_design_scores_gemma":[0.000908656,0.000675056,0.1002486,0.00001707548,0.00003347014,0.00005443666,0.0001740617,0.0240333,0.8691965,0.001793723,0.002473988,0.0003910403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978389,0.00002793601,0.000399475,0.0005067813,0.0004471051,0.0003657672,0.0003463151,0.000009521659,0.00005818506],"genre_scores_gemma":[0.9984769,0.00001689674,0.0001374934,0.00005334676,0.0000376734,0.0000222996,0.0008406408,0.00001291678,0.000401869],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1234692,"threshold_uncertainty_score":0.3514594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003131397518395209,"score_gpt":0.2017102000516656,"score_spread":0.1985788025332704,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}