{"id":"W4313382758","doi":"10.4049/jimmunol.202.supp.131.2","title":"A robust human immunophenotyping workflow using CyTOF technology coupled with Maxpar Pathsetter, an automated data analysis software","year":2019,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fluidigm (Canada)","funders":"","keywords":"Mass cytometry; Software; Computer science; Workflow; Computational biology; Data mining; Biology; Phenotype; Operating system; Database","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003632473,0.001700967,0.001166276,0.002476404,0.0009616416,0.002124599,0.001999528,0.0008427885,0.01220925],"category_scores_gemma":[0.003417591,0.001140374,0.0009840928,0.001061101,0.0006435448,0.001233867,0.001769615,0.001662557,0.01126578],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009659915,"about_ca_system_score_gemma":0.002049554,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001386553,"about_ca_topic_score_gemma":0.001650967,"domain_scores_codex":[0.9969785,0.0003347442,0.0003021123,0.001068157,0.001142944,0.0001735395],"domain_scores_gemma":[0.9979643,0.0005431814,0.0002246216,0.0004474271,0.0007168032,0.0001038205],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007911636,0.0001301265,0.003706878,0.0007509982,0.000164453,0.0005088173,0.0004633718,0.003373054,0.7012556,0.005482361,0.06476881,0.2186044],"study_design_scores_gemma":[0.0001333123,0.0002581488,0.007265257,0.0001521163,0.00008043612,0.0009163497,0.00007458092,0.07259507,0.7753356,0.004005469,0.1388853,0.0002983723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01436695,0.0002981455,0.8733588,0.0004087512,0.0001367939,0.0007570969,0.008129539,0.09899635,0.003547604],"genre_scores_gemma":[0.03484522,0.0002884809,0.9394659,0.0004717243,0.00007386549,0.003101395,0.01095209,0.00677478,0.004026433],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01220925,"threshold_uncertainty_score":0.04084408,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02986862930207132,"score_gpt":0.2637338964960931,"score_spread":0.2338652671940218,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}