{"id":"W4313406930","doi":"10.4049/jimmunol.208.supp.170.13","title":"The microbiome enhances transcriptional inflammatory signatures and delays clinical resolution in cutaneous leishmaniasis","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dysbiosis; Immune system; Immunology; Biology; Microbiome; Cutaneous leishmaniasis; Staphylococcus aureus; FOXP3; Lesion; Leishmaniasis; Microbiology; Medicine; Bioinformatics; Pathology; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002077408,0.0002363836,0.0003954624,0.0004083231,0.0002584138,0.0005120077,0.00009621951,0.0003125645,0.001605976],"category_scores_gemma":[0.000475645,0.0001611927,0.0003020902,0.0002957281,0.0002162395,0.0002050087,0.0004021398,0.0004918536,0.0002671566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002754028,"about_ca_system_score_gemma":0.0001813539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005837212,"about_ca_topic_score_gemma":0.0008213323,"domain_scores_codex":[0.9997876,0.00004847121,0.00001484451,0.00006162438,0.00003816549,0.00004919509],"domain_scores_gemma":[0.9997711,0.00003668955,0.00008793377,0.00001308308,0.00003913632,0.0000521063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002058137,0.0002254218,0.114818,0.0004922904,0.0001457964,0.0004283522,0.0003457433,0.0007776069,0.8570764,0.0001100566,0.0008797577,0.02264246],"study_design_scores_gemma":[0.00007504157,0.00166392,0.8703541,0.0001432611,0.0002702343,0.002181738,0.001359632,0.006140213,0.1101711,0.0006347834,0.006955143,0.000050911],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996126,0.001073813,0.001058185,0.0001151001,0.00001999187,0.00003509733,0.001082511,0.00004276283,0.0004466238],"genre_scores_gemma":[0.9967844,0.0003347397,0.001215944,0.0001527737,0.00001280137,0.00004042996,0.001073776,0.000017841,0.0003671811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001605976,"threshold_uncertainty_score":0.005372584,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02245523689455832,"score_gpt":0.3047885256977663,"score_spread":0.282333288803208,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}