{"id":"W4313471230","doi":"10.3390/v15010128","title":"Molecular Epidemiology of HIV-1 in Ghana: Subtype Distribution, Drug Resistance and Coreceptor Usage","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; AIDS Vancouver; Simon Fraser University","funders":"Canadian Institutes of Health Research; National Nuclear Security Administration; U.S. Department of Energy","keywords":"Subtyping; Molecular epidemiology; Drug resistance; Genetic diversity; Virology; Biology; Lentivirus; Human immunodeficiency virus (HIV); Genome; Genetics; Genotype; Gene; Medicine; Viral disease; Population; Environmental health","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003660397,0.0002064605,0.0001935059,0.0007277802,0.0003073276,0.0004447923,0.0002719922,0.0003302569,0.001535962],"category_scores_gemma":[0.0009015533,0.0002430036,0.0001168086,0.00100341,0.0005872611,0.0005347742,0.0003759663,0.0002957585,0.0002303573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005691167,"about_ca_system_score_gemma":0.000408923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01581614,"about_ca_topic_score_gemma":0.01434763,"domain_scores_codex":[0.9997793,0.00007995876,0.00002349091,0.00004104044,0.00002651312,0.00004984768],"domain_scores_gemma":[0.9995554,0.00006744199,0.000247398,0.00001995347,0.00004211241,0.0000677035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008794293,0.00002868943,0.9873595,0.00007395529,0.00001413811,0.0003573445,0.0011881,0.00008568277,0.003709187,0.00006730804,0.0001234599,0.006904715],"study_design_scores_gemma":[0.000006660511,0.00009389795,0.9949718,0.00006595051,0.000009612875,0.001579403,0.002223891,0.0001054184,0.0002251101,0.00006327869,0.0006492814,0.000005732468],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984092,0.0007921027,0.00008911813,0.0001319057,0.000002882833,0.00001363523,0.0002277835,0.000003063093,0.0003302802],"genre_scores_gemma":[0.9982374,0.001062595,0.0003490313,0.00006512972,0.000006868675,0.000009790513,0.0001769272,0.000001965397,0.00009014933],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01581614,"threshold_uncertainty_score":0.03144813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02482569369899479,"score_gpt":0.2868745044932633,"score_spread":0.2620488107942685,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}