{"id":"W4313597383","doi":"10.1016/j.medj.2022.12.002","title":"Breastfeeding enrichment of B. longum subsp. infantis mitigates the effect of antibiotics on the microbiota and childhood asthma risk","year":2023,"lang":"en","type":"article","venue":"Med","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children's Hospital Research Institute of Manitoba; McMaster University; Canada's Michael Smith Genome Sciences Centre; University of Alberta; Public Health Ontario; BC Centre for Disease Control; University of British Columbia; Hospital for Sick Children; University of Manitoba; University of Toronto; BC Children's Hospital","funders":"Provincial Health Services Authority; W. Garfield Weston Foundation; Genome British Columbia; Canada Foundation for Innovation; Bill and Melinda Gates Foundation; Manitoba Medical Service Foundation; Canadian Institute for Advanced Research; Children’s Hospital Foundation of Manitoba; Canadian Institutes of Health Research; Mitacs; Genome Canada","keywords":"Breastfeeding; Asthma; Microbiome; Metagenomics; Bifidobacterium longum; Antibiotics; Medicine; Breast feeding; Allergy; Immunology; Biology; Bifidobacterium; Microbiology; Pediatrics; Bioinformatics; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004030078,0.0002843436,0.0003399712,0.0003429971,0.0003700682,0.0004835015,0.0002376554,0.0002914523,0.001667363],"category_scores_gemma":[0.0009153717,0.0001318253,0.0002514168,0.0003622454,0.0001812879,0.0001995072,0.0006131823,0.0004264477,0.0002331023],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005053301,"about_ca_system_score_gemma":0.0008437113,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01353894,"about_ca_topic_score_gemma":0.01812383,"domain_scores_codex":[0.9996599,0.00007279965,0.00001358358,0.00007900994,0.00007573974,0.00009891597],"domain_scores_gemma":[0.9995129,0.00005096907,0.0002009463,0.00003215977,0.00007782425,0.0001252993],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001612611,0.0002237242,0.7059643,0.0002436107,0.0003373872,0.0002423444,0.0003070527,0.0002741885,0.2551422,0.0001966508,0.001112927,0.03434294],"study_design_scores_gemma":[0.00001125797,0.0004722761,0.9864248,0.00004808637,0.0001286706,0.000335285,0.0002941989,0.0003814748,0.009537956,0.00007745711,0.002281895,0.000006727835],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970869,0.001229825,0.0002577965,0.0002119559,0.00001138197,0.000006556348,0.0006238595,0.00001561175,0.0005561651],"genre_scores_gemma":[0.9967924,0.0007820461,0.0008777044,0.0001860542,0.00001103468,0.00002257244,0.0008154744,0.00001006858,0.0005025849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01353894,"threshold_uncertainty_score":0.02692032,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003220335032862126,"score_gpt":0.2189548755497593,"score_spread":0.2157345405168972,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}