{"id":"W4313824524","doi":"10.3390/genes14010172","title":"Functional Characterization of a Phf8 Processed Pseudogene in the Mouse Genome","year":2023,"lang":"en","type":"article","venue":"Genes","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Pseudogene; Gene; Biology; Genetics; Molecular biology; Cell biology; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001719857,0.00004252811,0.00004552253,0.00004460386,0.00003038586,0.00001013099,0.00009894778,0.00003423945,0.00001175209],"category_scores_gemma":[0.00002348797,0.00003119919,0.00002281153,0.0001873476,0.00001958292,0.000002521524,0.00003121904,0.00002414496,0.00001241231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002590558,"about_ca_system_score_gemma":0.00003593033,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006768145,"about_ca_topic_score_gemma":0.00001371224,"domain_scores_codex":[0.9995595,0.00002811143,0.00008555418,0.0001060706,0.0001043746,0.0001164066],"domain_scores_gemma":[0.9997964,0.000004015868,0.00002459584,0.000118397,0.00004129795,0.00001531692],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003149622,0.00001595552,0.002138477,0.00001796825,0.000006872248,0.000001127358,0.00003911441,0.0000735408,0.9966815,0.000009755055,0.00007840798,0.0009057816],"study_design_scores_gemma":[0.0002006169,0.00006356076,0.1222803,0.000001742737,0.000001741869,0.000003113015,0.00009560205,0.0001650583,0.8738022,0.00001044716,0.0033268,0.00004888808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992485,0.0001004998,0.000260904,0.0002110948,0.00001386795,0.0001014313,0.00001302972,0.000005172704,0.00004548937],"genre_scores_gemma":[0.9974711,0.0002932363,0.00001565645,0.00007988154,0.0001062163,0.00003446979,0.0005885483,0.000006225682,0.001404697],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1228793,"threshold_uncertainty_score":0.1272266,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0232205132223002,"score_gpt":0.2580103435609783,"score_spread":0.2347898303386781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}