{"id":"W4317213709","doi":"10.1128/mra.01037-22","title":"Terpene Synthase Gene Amplicons from Subseafloor Sediment","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Institut National de la Recherche Scientifique","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Compute Canada","keywords":"Actinobacteria; Terpene; Amplicon; Sediment; Cyanobacteria; Biology; Gene; Microbiology; Biochemistry; Genetics; 16S ribosomal RNA; Polymerase chain reaction; Bacteria; Paleontology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001022996,0.000608422,0.0003007886,0.001647076,0.0002989279,0.0003626508,0.0001531915,0.0002007801,0.00114771],"category_scores_gemma":[0.0003082199,0.0001704148,0.0003221203,0.001228185,0.0001684098,0.0001618165,0.000289546,0.0003157444,0.0007465563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001287246,"about_ca_system_score_gemma":0.0004959255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003723919,"about_ca_topic_score_gemma":0.005088964,"domain_scores_codex":[0.9998498,0.00000557558,0.00001565557,0.00004589718,0.0000513211,0.00003171755],"domain_scores_gemma":[0.9997807,0.00002805429,0.00006719574,0.00001578996,0.00005276015,0.00005540592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001240249,0.0000233505,0.00929004,0.00007557558,0.00001009085,0.000195332,0.0001828635,0.00005980818,0.9837438,0.00003200279,0.0001203251,0.006142704],"study_design_scores_gemma":[0.00003143699,0.0004928209,0.5012864,0.00005272825,0.0002142888,0.002317364,0.001222847,0.0008282454,0.4770454,0.000138427,0.01632057,0.00004949592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9857256,0.0004149319,0.002576887,0.00006683594,0.00003710782,0.00006007888,0.01023184,0.00009811393,0.0007886225],"genre_scores_gemma":[0.9079963,0.002111771,0.02197985,0.000184164,0.00008236102,0.0001931913,0.05988584,0.00009589993,0.007470593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003723919,"threshold_uncertainty_score":0.007404506,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01468228687573603,"score_gpt":0.2379355344248406,"score_spread":0.2232532475491045,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}