{"id":"W4317569575","doi":"10.1007/s00705-022-05623-3","title":"Isolation of vB_AsaM_LPM4 reveals the dynamics of Prophage 3 in Aeromonas salmonicida subsp. salmonicida","year":2023,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Prophage; Biology; Aeromonas salmonicida; Lysogenic cycle; Microbiology; Genetics; Bacteriophage; Aeromonas; Genome; Virology; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001115709,0.0002433551,0.0001841257,0.0003141155,0.0002195053,0.0003534401,0.0002344356,0.0002643442,0.001375356],"category_scores_gemma":[0.0002609932,0.0001501029,0.0002741129,0.0002194259,0.0001626686,0.0001222312,0.0002783195,0.0007445418,0.0007427064],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003040675,"about_ca_system_score_gemma":0.0002522136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003255134,"about_ca_topic_score_gemma":0.002978452,"domain_scores_codex":[0.999916,0.000008407293,0.000004396441,0.00001434708,0.00002477695,0.00003207425],"domain_scores_gemma":[0.9998509,0.00004901743,0.00001960534,0.00001590284,0.00002740409,0.00003722047],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006647773,0.00002294954,0.001110232,0.00001083962,0.000002638566,0.00002178018,0.0000237705,0.00004032627,0.997852,0.0000370293,0.00003678254,0.0007752785],"study_design_scores_gemma":[0.00002791051,0.000609458,0.1200442,0.00002400895,0.00002304126,0.0003807869,0.0004234237,0.004738933,0.8699952,0.0002077365,0.003506152,0.00001910741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976104,0.0001046143,0.001154917,0.00005490015,0.00001242446,0.00001218753,0.0004128049,0.0000252504,0.0006124529],"genre_scores_gemma":[0.98368,0.0001554029,0.00484955,0.0001046014,0.00001502324,0.00004242875,0.005054167,0.00006106513,0.006037754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003255134,"threshold_uncertainty_score":0.006472349,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00899448979245655,"score_gpt":0.2438455242465954,"score_spread":0.2348510344541389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}