{"id":"W4317678595","doi":"10.1002/cam4.5639","title":"Clinical sequencing identifies potential actionable alterations in a high rate of urachal and primary bladder adenocarcinomas","year":2023,"lang":"en","type":"article","venue":"Cancer Medicine","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Prevention of Organ Failure; University of British Columbia","funders":"Innovációs és Technológiai Minisztérium; Horizon 2020 Framework Programme; Magyar Tudományos Akadémia","keywords":"KRAS; In silico; Medicine; Adenocarcinoma; Gene; DNA sequencing; Cancer research; Computational biology; Oncology; Bioinformatics; Cancer; Biology; Internal medicine; Colorectal cancer; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002032768,0.0004064084,0.000519098,0.001686959,0.0003683165,0.0008596453,0.000367331,0.0007244104,0.001265064],"category_scores_gemma":[0.005044663,0.0002123019,0.0004048887,0.0009311621,0.0004069209,0.0002047008,0.0005299056,0.0003440347,0.0004492409],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002779273,"about_ca_system_score_gemma":0.0004872295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001054921,"about_ca_topic_score_gemma":0.001407007,"domain_scores_codex":[0.9975818,0.0004393196,0.0003243104,0.0006873857,0.0008162016,0.0001510344],"domain_scores_gemma":[0.9974878,0.001000929,0.0006568292,0.0002771628,0.00042976,0.0001474876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008978386,0.0001110158,0.8018916,0.0004309921,0.0002170482,0.003829667,0.0003672256,0.001686437,0.1331341,0.0002435921,0.0005398701,0.05665052],"study_design_scores_gemma":[0.0000602759,0.0005849765,0.8473161,0.0001193476,0.0003784583,0.01997126,0.0003554207,0.01464869,0.1102861,0.000495664,0.005750031,0.00003364417],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9873812,0.001356735,0.0093424,0.0001176892,0.0000143681,0.00008369124,0.000842856,0.0001828843,0.0006781716],"genre_scores_gemma":[0.9922806,0.000266775,0.005970607,0.00007300864,0.00001070715,0.0000318627,0.001078494,0.00003232498,0.0002555655],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002032768,"threshold_uncertainty_score":0.01075047,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06365692877078552,"score_gpt":0.3723196583319112,"score_spread":0.3086627295611257,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}