{"id":"W4317932885","doi":"10.3390/pathogens12020182","title":"Infection of the Ex Vivo Tonsil Model by HTLV-1 Envelope-Pseudotyped Viruses","year":2023,"lang":"en","type":"article","venue":"Pathogens","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal; Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Virology; Tropism; Biology; Ex vivo; Tonsil; Tropical spastic paraparesis; Provirus; Tissue tropism; Virus; Viral replication; Viral envelope; Cell culture; Leukemia; In vivo; Immunology; Myelopathy; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001294567,0.0001208203,0.0001831489,0.00005399851,0.0002408568,0.000003764788,0.0001237059,0.0001440673,0.0002191837],"category_scores_gemma":[0.00007983515,0.00007808873,0.000112681,0.0002426639,0.0001824109,0.00002715864,0.0001631336,0.0001391777,0.0009592098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001611851,"about_ca_system_score_gemma":0.00003598279,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001755074,"about_ca_topic_score_gemma":0.00009281598,"domain_scores_codex":[0.9992808,0.00008901194,0.0001817308,0.0001780129,0.00003424375,0.0002361616],"domain_scores_gemma":[0.9995653,0.0000670797,0.00008261226,0.0002280274,0.00004696184,0.000009999701],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002420348,0.00004194895,0.01077813,0.00001269535,0.0000852771,5.952111e-7,0.0004529552,0.0001100677,0.9489455,0.0001649685,0.03856971,0.000813975],"study_design_scores_gemma":[0.0006781358,0.0001046863,0.0160153,0.00002636596,0.0001066686,0.00001327271,0.0001682977,0.0001515022,0.8123686,0.0003521333,0.1697535,0.000261567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902086,0.001290022,0.0000879014,0.000147248,0.0007244795,0.0001588283,0.0002747185,0.0001287061,0.006979526],"genre_scores_gemma":[0.9746996,0.0004731228,0.00001449922,0.0001259025,0.00001870451,0.00001561389,0.00001650044,0.00001395916,0.02462214],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1365769,"threshold_uncertainty_score":0.9998187,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02342815822191697,"score_gpt":0.2418839072634627,"score_spread":0.2184557490415458,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}