{"id":"W4318052281","doi":"10.3390/plants12030545","title":"RNA-Seq Dissects Incomplete Activation of Phytoalexin Biosynthesis by the Soybean Transcription Factors GmMYB29A2 and GmNAC42-1","year":2023,"lang":"en","type":"article","venue":"Plants","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Food and Agriculture; York University; West Virginia University; China Scholarship Council; U.S. Department of Agriculture","keywords":"Phytoalexin; Elicitor; Biosynthesis; Biology; Transcription (linguistics); Transcription factor; Biochemistry; Gene; Phytophthora sojae; Secondary metabolism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002139069,0.00009283633,0.0001223186,0.00001935996,0.0001547994,0.00002051209,0.0001846047,0.00007675536,0.00004433025],"category_scores_gemma":[0.00006915406,0.000030725,0.00003542549,0.0002213144,0.0000852409,0.00005828154,0.0000368067,0.00008814619,0.00001548736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000711178,"about_ca_system_score_gemma":0.00000326417,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003196293,"about_ca_topic_score_gemma":0.0002126272,"domain_scores_codex":[0.9991914,0.0001256688,0.0001162165,0.0001834606,0.0001690804,0.0002141709],"domain_scores_gemma":[0.9994145,0.0004295,0.00005173866,0.00004275508,0.00001509573,0.00004641378],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003413876,0.0000158206,0.0125794,0.000005577001,0.00001458839,0.00000126291,0.00009639541,2.776756e-7,0.9775288,0.000009761302,0.0008385301,0.008875444],"study_design_scores_gemma":[0.00007092008,0.00007914334,0.4755067,0.00002232196,0.000004426289,0.000003610289,0.0003302292,0.00006813084,0.522597,0.0001822892,0.001048479,0.00008678251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981171,0.00004782659,0.000002335632,0.0009970505,0.00003553962,0.0001565365,0.000477178,0.00004027538,0.0001261091],"genre_scores_gemma":[0.9992466,0.0001133655,0.000002942508,0.00003923422,0.00002571669,0.00000699861,0.0004768995,8.737334e-7,0.0000873793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4629273,"threshold_uncertainty_score":0.1252929,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04353527343837806,"score_gpt":0.2435323059534704,"score_spread":0.1999970325150923,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}