{"id":"W4318069271","doi":"10.1128/mbio.00188-23","title":"Virology under the Microscope—a Call for Rational Discourse","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Western University; Queen's University","funders":"National Institute of Dental and Craniofacial Research; National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Medical Research Council; Canadian Institutes of Health Research; Plant Sciences Institute, Iowa State University; Advanced Research Projects Agency; Defense Advanced Research Projects Agency; Directorate for Biological Sciences; Centers for Disease Control and Prevention; Deutsche Forschungsgemeinschaft; Vir Biotechnology; Natural Sciences and Engineering Research Council of Canada; Pfizer; Moderna; Zoetis; Novavax; Iowa State University; Associazione Italiana per la Ricerca sul Cancro; Eli Lilly and Company; U.S. Department of Defense; Fast Grants; United States Agency for International Development; Biomedical Advanced Research and Development Authority; Ohio State University; Coalition for Epidemic Preparedness Innovations; Oregon Health and Science University; National Science Foundation; UK Research and Innovation; AstraZeneca; National Institute of Allergy and Infectious Diseases; Australian Government; Bill and Melinda Gates Foundation; National Cancer Institute; Gilead Sciences; National Institutes of Health; Regeneron Pharmaceuticals; U.S. Department of Agriculture","keywords":"Virology; Immunosuppression; Humanity; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Disease; 2019-20 coronavirus outbreak; Medicine; Infectious disease (medical specialty); Immunology; Political science; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003049493,0.00005270285,0.0001258245,0.00003534836,0.00008483454,0.000006869387,0.0000718075,0.00004435247,0.000105989],"category_scores_gemma":[0.0001744609,0.0000320391,0.00006414881,0.00006558844,0.0001757735,0.00001796683,0.00004155428,0.0001055491,0.0002443389],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000206117,"about_ca_system_score_gemma":0.00004687575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003216004,"about_ca_topic_score_gemma":0.000104014,"domain_scores_codex":[0.9993177,0.00005642036,0.0001135999,0.0001296162,0.0000696365,0.000313016],"domain_scores_gemma":[0.9996938,0.00006003596,0.00001683287,0.0001284894,0.00003110159,0.00006971968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0006641289,0.00007233284,0.01639404,0.00003454355,0.00008867283,0.00003160838,0.00008267676,0.00005016278,0.1241736,0.003922213,0.8523614,0.002124714],"study_design_scores_gemma":[0.005013146,0.002402283,0.7045132,0.00004345371,0.0000628061,0.0002041552,0.0006751411,0.004245152,0.00156337,0.006870423,0.2742416,0.0001652529],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8259062,0.00008721754,0.004225816,0.1685725,0.0002272935,0.0004183071,0.00005965915,0.00004748911,0.0004555474],"genre_scores_gemma":[0.9834619,0.00004652751,0.000372234,0.006315121,0.0003143008,0.0001107051,0.000222121,0.00001101021,0.009146117],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6881192,"threshold_uncertainty_score":0.3140564,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05572756658819965,"score_gpt":0.4074698924301118,"score_spread":0.3517423258419122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}